Microtus oregoni (creeping vole): 121436095
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Entry
121436095 CDS
T08307
Symbol
Scn4a
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
morg
Microtus oregoni (creeping vole)
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
morg04040
]
121436095 (Scn4a)
Ion channels [BR:
morg04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
121436095 (Scn4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
121436095
NCBI-ProteinID:
XP_041491688
LinkDB
All DBs
Position
Unknown
AA seq
1838 aa
AA seq
DB search
MASSSLPTLVPPGPHCLRPFTPESLAAIEQRAVEEEARLQRNKQMEIEEPERKPRSDLEA
GKNLPLIYGDPPPEVIGIPLEDLDPYYSDKKTFIVLNKGKAIFRFSATPALYMLSPFSIV
RRVAIKVLIHALFSMFIMITILTNCVFMTMSNPPSWSKDVEYTFTGIYTFESLIKMLARG
FCIDDFTFLRDPWNWLDFSVITMAYVTEFVDLGNISALRTFRVLRALKTITVIPGLKTIV
GALIQSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRQKCVRWPPPMNDTNTTWYGNDTW
YSNDTWYSNDTWSSQESWASNYTFDWDAYINDEGNFYFLEGSNDALLCGNSSDAGHCPEG
YECIKAGRNPNYGYTSYDTFSWAFLALFRLITQDYWENLFQLTLRAAGKTYMVFFVVIIF
LGSFYLINLILAVVAMAYAEQNEATLAEDQEKEEEFQQMLEKFKKHQEELEKAKAAQALE
GGEADGDPVHNKDCNGSLDTSGEKGPPRPSCSADSAISDAMEELEEAHQKCPPWWYRCAH
KVLIWNCCAPWVKFKHIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVLSVG
NLVFTGIFTAEMVLKLIAMDPYEYFQQGWNIFDSFIVTLSLVELGLANVQGLSVLRSFRL
LRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKI
ASDCTLPRWHMNDFFHSFLIVFRILCGEWIETMWDCMEVAGQAMCLTVFLMVMVIGNLVV
LNLFLALLLSSFSADSLAASDEDGEMNNLQIAIGRIKWGIGFAKAFLLGLLHGKILSPKD
IMLTLGEPGGAGETGESAPEDEKKEPPPEDENKELKDNHILNHVGLSDGPRSSIELDHLN
FINNPYLTIQVPIASEESDLEMPTEEETDTFSEPEDIKKPPQPLYDGNSSVCSTADYKPP
EEDREEQAEENPEGELPEECFTEACVQRCPCLYVDISQGRGKMWWTLRRACFKIVEHNWF
ETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFIVEMLLKWVAYGFKVYF
TNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVNAL
LGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCVNTTTSERFDISVVNNKSECESLM
HTGQVRWMNVKVNYDNVGLGYLSLLQVATFKGWMDIMYAAVDSREKEEQPDYEVNIYMYL
YFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQKKYYNAMKKLGSKKPQK
PIPRPQNKIQGMVYDFVTKQVFDISIMILICLNMVTMMVETDDQSQLKVDILYNINMVFI
IIFTGECVLKMFALRHYYFTIGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLA
RIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFAYVKKESGI
DDMFNFETFGNSIICLFEITTSAGWDGLLNPILNSGPPDCDPTLENPGTNIKGDCGNPSI
GICFFCSYIIISFLIVVNMYIAIILENFNVATEESSEPLSEDDFEMFYETWEKFDPDATQ
FIDYNRLSDFVDTLQEPLRIAKPNKIKLITLDLPMVPGDKIHCLDILFALTKEVLGDSGE
MDALKQTMEEKFMAANPSKVSYEPITTTLKRKQEEVCAIKIQRAYRRHLLQRSVKQASYM
YRHSQDGNGVGAPEKEGLLANTMNKIYGPESENSGVQGQGEEEKGSTGDAGPTVELTPTS
SLDTTQTPPPSAPPPSAPPPQSAPQGQTVRPGVKESLV
NT seq
5517 nt
NT seq
+upstream
nt +downstream
nt
atggccagctcatctctgcccaccctggtacccccgggtccccactgcctgcgtcccttc
acccccgagtccctggcagccatagagcagcgggcagtggaggaggaggcccggctacag
cggaataagcaaatggagattgaggagcctgagcggaaaccacgcagcgacctggaagcc
ggcaagaacctaccgctcatctacggggaccccccacctgaagtcatcggcatccccctg
gaggacctggacccttactacagtgacaagaagaccttcattgtgctcaacaaaggcaag
gccatcttccgcttctccgccacgcctgccctctacatgctgagccccttcagcatcgtc
aggcgtgtggccatcaaggtgctcattcatgcgctgttcagcatgtttatcatgattacc
atcctgaccaactgtgtgttcatgaccatgagcaacccgccatcttggtccaaggacgtg
gagtacaccttcactgggatctacactttcgaatctcttattaagatgttggcccgaggc
ttctgcattgatgacttcacattcctccgggacccctggaactggctggactttagtgtc
atcacgatggcgtatgtgacagagtttgtggacttgggcaacatctcagccctgaggacc
ttccgtgtgctgcgggccctgaaaaccatcacggttatcccagggctgaagaccattgta
ggagccctgatccagtccgtgaaaaagctgtctgacgtcatgatcctcaccgtcttctgt
ctgagcgtctttgcgctggtggggctgcagctcttcatggggaacctgcgtcagaagtgc
gtgcgctggcccccgcccatgaatgacaccaacaccacgtggtacggcaatgacacgtgg
tacagcaatgacacgtggtatagcaacgacacttggagcagccaggagagctgggccagc
aactacacctttgactgggatgcttacatcaacgacgaaggaaacttctacttcctggag
ggctccaatgatgccctgctctgtgggaacagcagtgatgccgggcactgccccgaaggt
tatgaatgcataaaggctggacggaaccctaactatggctacaccagctatgacaccttc
agctgggccttcctagctctcttccgcctcataacgcaggactactgggagaaccttttc
cagctgacccttcgagcagctggcaagacctacatggtcttcttcgtggtcatcatcttc
ctgggctccttctacctcatcaatctgatcctagcggtggtggccatggcctatgcggag
cagaatgaagctaccttggctgaggaccaggagaaagaggaggagtttcaacagatgctt
gagaaattcaaaaaacatcaggaggagttagaaaaggctaaggctgcccaggctctggaa
ggtggggaggcagatggggacccagtccacaacaaagactgcaatggcagcctggacacg
tccggggagaaggggcccccaaggccgagctgcagcgcagacagtgccatctcagatgct
atggaggagctggaagaagcccaccagaagtgcccgccgtggtggtacaggtgtgcccac
aaagtgctcatttggaactgctgcgccccgtgggtgaagttcaagcatatcatccacctg
atcgtcatggaccccttcgtggacctgggcatcaccatctgcatcgtgctcaacaccctc
ttcatggccatggagcattaccccatgaccgagcactttgacaacgtgctctctgtgggc
aacttggtcttcacgggcattttcaccgcagagatggtgctgaagctgattgccatggac
ccctatgagtatttccaacagggctggaacatcttcgacagcttcattgttaccctcagc
ctggtggagctgggcctggccaacgtgcaggggctgtcggtgctgcgttccttccgtctg
ctgcgtgtcttcaagctggccaagtcatggccaacactcaacatgctcatcaaaatcatt
ggcaactcagtgggtgcgctgggcaacctgacactggtgctggctatcatcgtctttatc
ttcgccgtggtgggcatgcagctgtttggcaagagctataaggaatgtgtgtgtaagata
gcctcagactgcaccctcccgcgctggcacatgaacgacttcttccactccttcctcatc
gtcttccgcatcctctgcggggagtggatcgagaccatgtgggactgcatggaggtggcc
ggccaggccatgtgcctcaccgtcttcctcatggtcatggtcattggcaacctggtggtt
ctgaatctgttcctggctctcctgctgagctccttcagcgccgacagcctggcagcttcc
gatgaagacggcgagatgaacaacctgcagattgccatcggacgcattaagtggggcatc
ggctttgccaaagccttcctcctggggctgctgcacggcaagatcctgagccccaaggac
ataatgctcaccctcggtgagcccgggggtgctggggagacgggggagagcgctcctgag
gatgagaagaaggaaccgcccccagaagatgagaacaaggaactgaaggacaatcatatc
ctgaaccacgtgggcctgagcgatggcccccgctccagcatcgagctggaccacctcaac
tttatcaacaacccctacctcaccatccaggtgcccattgcctccgaggagtccgacctg
gagatgcccaccgaggaggagactgacacattctcggagcctgaagacattaagaagcca
ccacagcccctctacgatggaaactcctccgtctgcagcacggctgactacaagccccct
gaagaggaccgtgaggagcaggctgaggagaaccctgagggggagctgcctgaggaatgc
ttcaccgaagcctgcgtgcaacgctgcccctgcctctatgtggacatctcccagggccgt
gggaaaatgtggtggacgctgcgccgggcctgcttcaagattgtcgagcacaactggttt
gagaccttcattgtcttcatgatcttgctcagcagtggagccctggccttcgaagacata
tacattgagcagcgaagagtgatccggactatcctggaatatgctgacaaggtcttcacc
tacatcttcatcgtggagatgctgctcaagtgggtggcctacggcttcaaggtgtatttc
accaatgcctggtgttggctcgatttcctcatcgtggatgtctccatcatcagcctggtg
gccaactggctgggctactctgagctggggcccatcaaatccctgcgcacactgcgggcc
ctgcgtcccctgagggcgctctctcgatttgagggcatgagggtggtggtgaacgccctc
ctgggagccatcccctccatcatgaacgtcctcctcgtctgcctcatcttctggcttatc
ttcagcatcatgggggtcaacttgttcgctggcaagttctactactgtgtcaacaccacc
acctctgagaggttcgatatctctgtggtcaacaataagtctgagtgtgagagcctcatg
cacacgggccaggtccgatggatgaacgttaaggtcaactatgacaacgtgggcctgggc
tatctgtccctccttcaggtggccactttcaagggttggatggatatcatgtatgcggct
gtggactcccgggagaaggaggagcagccagactatgaggtgaatatctacatgtacctt
tacttcgtcatcttcatcatctttggctccttcttcacactcaacctcttcatcggggtc
atcattgacaacttcaaccaacagaagaagaagtttggagggaaagacatcttcatgacg
gaggagcagaagaagtactacaacgccatgaagaaactgggctccaagaagccccagaag
cccatcccccgccctcagaacaagatccagggcatggtgtatgacttcgtgacaaagcag
gtgtttgacatctccatcatgatcctcatctgccttaacatggttaccatgatggtggag
acagacgaccagagccagctcaaggtggacatcctgtacaacatcaacatggtcttcatc
atcatcttcacaggggagtgtgtactcaagatgttcgccctgcgccactactacttcacc
attggctggaacatcttcgacttcgtggttgtcatcttgtccatcgtgggcctcgcgctt
tctgacttgatacagaaatatttcgtgtcgcccacgttgttccgtgtgatccgcttggca
cggatcgggcgtgtcttgcgtctgatccgtggggccaagggcatccggacgctgttgttt
gccctcatgatgtcactgcctgccctcttcaacatcggcctccttctctttctggttatg
ttcatctactccatcttcggcatgtccaacttcgcctatgtcaagaaagaatcgggcatc
gacgacatgtttaacttcgagaccttcggcaacagtatcatttgtctcttcgagatcacc
acgtcagctggctgggatgggctactgaaccccatcctcaacagtgggcccccagattgt
gatccgacgctggagaacccaggcaccaacatcaagggtgactgcggcaacccatccatc
ggcatctgcttcttctgcagctacatcatcatttccttcctcatcgtggtcaacatgtac
attgccatcatcctagagaatttcaacgtggccactgaggagagcagcgagcccctcagt
gaggatgactttgagatgttctatgagacctgggaaaagttcgaccctgatgccactcag
ttcatcgactacaaccgcctctccgactttgtggacaccctgcaggagccgctgagaatc
gccaagcccaacaagatcaagctgatcacgttagacctgcccatggtgccgggggacaag
atccactgcctggacatcctctttgccctgaccaaagaggtactgggtgactctggggag
atggatgccctcaaacagaccatggaggagaagttcatggcagccaacccctccaaggtc
tcctacgagcccattactaccaccctcaagaggaagcaggaggaggtgtgtgccatcaaa
atccagagggcctaccgccgccacttgctgcagcgctctgtgaagcaggcctcctacatg
taccgccacagccaggatggcaatggagtcggggcccccgagaaggagggattgcttgcc
aacaccatgaacaagatatacggccctgagagtgagaacagtggtgtgcagggtcaggga
gaggaggagaagggttctacaggggatgctggacccaccgtggagctcacacccaccagc
tccttggacaccactcagactcctcctccttcagcaccaccaccatcggcaccaccaccg
caatcagcaccacaggggcagactgtgcggccaggggtcaaagagtctctcgtctag
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integrated database retrieval system
