Microtus oregoni (creeping vole): 121441146
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Entry
121441146 CDS
T08307
Name
(RefSeq) LOW QUALITY PROTEIN: 116 kDa U5 small nuclear ribonucleoprotein component-like
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121441146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
morg03041
]
121441146
Spliceosome [BR:
morg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
121441146
Complex C
U5 SnRNP specific factors
121441146
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_IV
EFG_C
GTP_EFTU_D2
EFG_III
EFL1
Motif
Other DBs
NCBI-GeneID:
121441146
NCBI-ProteinID:
XP_041498213
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDFDEDDDELGRETKDLDEMDDEEDEDDVGEHDDDHPGMEVVLY
EDKKYYPTTEEVYGPEVETIAQEENTQPLIEPIIKPVKTKKFTLMEQTLPVTVYEMDFLA
DLMDNSELIXNMTLCGHLHHCKMCFLDCLIEQMHPEIRKRYDQDLCYTDILFTEQERGVD
IKSTPVTMVLPDTKGNXYLFDIMDTPGHVNFSDEVTAGLRISDGVVLFTDASEGVMLNTE
RLIKHAVQERLTVTVCFNKIDRLILELKLPPTDAYYKLRHIVDEINGLISMYSTNENLIL
SPLLGNVCFSSFQYSICFTLGSFVKIYADTFGDINYQEFAKRLWGDIYFDPKSRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLIRPLLRLVCK
KFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGIVDSDLGEAMSDCDPDGPLMCHTTKM
YSTDEGVQFHAFGRMLSGTIHAGQPVKVLGENYTLEDEEDSQICAVGRIWISVARYYIVV
NCVPAGNWVLIEGVDAQPIVKTATITESRGNEEAQIFLPLKFNTTSVIKIAVEPVNPSEL
PKMFDGLRKVNKSYPSFTTKVEESGEHVILGTRKLYLDCVMHNLRKMYSEIDIKVAHPVV
TFCETVVXTSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGESFQT
KYDWDLLDARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGIREGPLC
DELIRNVKFKILDAVLAQEPLHSGGGQIVPTARWVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARCRGHVTQDAPISGSPLYTIKAFSPAIDSFGCETDLCTHTQVQAFSLSF
FHHWQIVPGDPLDKRIVICPLEPQPAPHLAQEFMIKTLLRKGLNEDVSISKFFDGPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggatactgacttgtatgatgaatttgggaattatattggaccagagcttgattttgat
gaagatgatgatgaactgggaagagagacaaaagatcttgatgagatggatgatgaggag
gacgaggatgacgtgggagagcacgatgatgaccaccctgggatggaggtggtgctgtac
gaggacaagaagtactaccccaccactgaggaggtatatggccctgaggtggagaccata
gctcaggaggaaaacacccagcctctcatagagcccattataaagccagtgaaaaccaag
aagttcactctgatggagcagacgttacctgtcacggtgtatgagatggatttcttagca
gatctgatggacaactcagagctcatctgaaacatgaccctttgcggccatctccaccat
tgcaagatgtgctttttagattgtttaatagagcagatgcatccagaaatcagaaagcgc
tatgaccaagatctgtgctacacggacatcctcttcacagagcaagagagaggtgttgac
atcaaaagcactcctgtgacgatggtgctgccggataccaagggaaatntttatctcttc
gacatcatggacacaccaggacatgtgaatttttctgatgaggtcacagctggcttacga
atctcggatggagtggtccttttcactgatgcgtctgagggggtgatgctgaatacagag
cgtctgatcaagcacgcagtgcaggagaggttaacagtcaccgtgtgcttcaacaaaatc
gaccggctgatcttggagctgaaactgcccccaacagatgcttattacaaacttcggcac
attgtggatgagatcaatggattaataagcatgtattccaccaacgagaacctgatcctt
tccccgctcctgggcaatgtctgcttctccagcttccagtacagcatctgcttcacactg
ggctcttttgtaaagatctatgctgacacctttggtgacattaattaccaggaatttgct
aaaagactctggggtgacatctacttcgatcccaaatcgagaaagttcacaaaaaaggct
ccaaccagcagctcccaaaggagctttgtggagtttatcttggagcccctttataagatc
cttgcacaggtggtgggtgatgtggacaccagcctgccaaggaccctggacgaacttggc
atccacctgaccaaggaggagctaaagctgatccgccctctgctcaggctagtctgcaaa
aagttctttggtgagttcacaggctttgtggacatgtgtgtgcagcacattccatctcca
aaggtgggcgccaaacccaagattgagcacacctacactggcatcgtggactccgacctt
ggcgaggccatgagtgactgtgacccagatggtcccctgatgtgccacaccactaagatg
tacagcacagacgaaggagttcagtttcatgcctttggtcggatgctaagtggcaccatc
catgctgggcagcctgtgaaggtactgggggagaactacactctggaagatgaggaagat
tcccagatctgtgccgtgggccgcatttggatctctgtcgccaggtactacattgtggtc
aattgtgttcctgctggcaactgggttctgattgaaggtgtcgatgctcagccgattgtg
aagacagcgaccataactgaatcccgaggcaatgaggaggctcagatcttcctgcccttg
aaattcaataccacatctgttatcaagattgctgtggagccagttaacccctcagagctg
cccaaaatgtttgacggcctgcggaaggtcaacaagagctatccatcgttcaccaccaag
gtggaagagtctggcgagcatgtgatcctgggcactaggaagctctacctggactgtgtg
atgcacaacctgcggaagatgtactcagagattgacatcaaggtggctcacccagttgtg
acgttctgtgagacagtggtataaacatcctccctcaaatgctttgctgaaacacccaat
aaaaagaacaagatcaccatgattgcagagcctcttgagaagggcctggctgaggacatt
gagaacgaagtggtccagatcacctggaacagaaagaagctgggcgagtccttccaaaca
aagtatgactgggatctgctggatgcccgttccatctgggcctttggtccggatgctaca
ggaccaaacattctagtggacgacacattgccctctgaggtagacaaggcacttctgggc
tcagtgaaggacagcatcgttcaaggtttccagtggggaatccgggagggacctctctgt
gatgaattgattcgaaatgtcaagtttaagatcctggatgcagtgcttgcccaggaaccc
ctccatagcggtggaggccagatcgtccccacagctaggtgggtggtttactctgccttc
ctcatggccactccccgtctgatggagccttactactttgtagaggtccaggcccctgca
gactgtgtgtctgctgtttacacagtcctggccaggtgcagggggcacgtgacccaggat
gcacccatttcaggctcccctctctacaccatcaaagctttcagtccagctatcgactct
tttggctgtgagactgacctctgcactcatacccaagtccaggccttttccctgtcattc
ttccaccattggcagattgtacctggtgatcctctggacaagcgcattgtcatctgccca
ttggagccacagccagctcctcacctggcccaggagttcatgatcaaaaccctgcttagg
aagggcctgaatgaagatgtgagcatcagtaagttcttcgatggtcctatgttgctggag
cttgccaaacaggacgttgtgctcaattatcccatgtga
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