Microtus oregoni (creeping vole): 121445909
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Entry
121445909 CDS
T08307
Symbol
Kdm2b
Name
(RefSeq) lysine-specific demethylase 2B isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121445909 (Kdm2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
morg03000
]
121445909 (Kdm2b)
04121 Ubiquitin system [BR:
morg04121
]
121445909 (Kdm2b)
03036 Chromosome and associated proteins [BR:
morg03036
]
121445909 (Kdm2b)
Enzymes [BR:
morg01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
121445909 (Kdm2b)
Transcription factors [BR:
morg03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
121445909 (Kdm2b)
Ubiquitin system [BR:
morg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121445909 (Kdm2b)
Chromosome and associated proteins [BR:
morg03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
121445909 (Kdm2b)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
121445909 (Kdm2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
Cupin_8
JmjC
AppA_SCHIC
Motif
Other DBs
NCBI-GeneID:
121445909
NCBI-ProteinID:
XP_041504010
LinkDB
All DBs
Position
Unknown
AA seq
1313 aa
AA seq
DB search
MEAEKDSGRRLRAIDRQRYDENEDLSDVEEIVSVRGFSLEEKLHSQLYQGDFVHAMEGKD
FNYEYVQREALRVPLVFRDKDGLGIKMPDPDFTVRDVKLLVGSRRLVDVMDVNTQKGTEM
SMSQFVRYYETPEAQRDKLYNVISLEFSHTKLEHLVKRPTVVDLVDWVDNMWPQHLKEKQ
TEATNALAEMKYPKVKKYCLMSVKGCFTDFHIDFGGTSVWYHVFRGGKIFWLIPPTLHNL
ALYEEWVLSGKQSDIFLGDRVERCQRIELKQGYTFFIPSGWIHAVYTPVDSLVFGGNILH
SFNVPMQLRIYEIEDRTRVQPKFRYPFYYEMCWYVLERYVYCVTQRSYLTQEYQRESMLI
DAPRKGSVDDFSSDSWLDMEEESCEQQPQEEEEKEEEEEEERDGADKTPKPPSDGPTSPT
STPSEEQEHTGKKPKAPAMRFLKRTLSNESEESVKSTTMPIDYPKTPTGSPSTELSTKWT
HLTEFELKGLKALVEKLESLPENKKCVPEGIEDPQALLEGVKNVLKEHVDDDPSLAITGV
PVVSWPKKTPKNRVVGRPKGKLGPASAVKLAANRTTAGARRRRTRCRKCEACLRTECGEC
HFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCLVCGEAGKEDTVEEEEGKFNLMLME
CSICNEIIHPGCLKIKESEGVVNDELPNCWECPKCNHAGKTGKAYNKQKRGPGFKYASNL
PGSLLKEQKMNRDNKEGQEPVKRRSECEEAPRRRSDEHPKKVPADSILRRKSDDVHLRRK
RKYEKPQELSGRKRASTLQTSPGSSSHLSPRPPLGSSLSPWWRSSLTYFQQQLKPGKEDK
LFRKKRRSWKNAEDRLALTNKPLRRFKQEPEDDLPEAPPKARESDQSRSSSPTAGPSTEG
AEGPEEKKKVKMRLKRRLPNKELSKELSKELNHEIQKTESTLAHETHQPIKSEPESENEE
PKRPLSHCERPHRFSKGLNGTPRELRHPLGPGLRSPPRVTSRPPPSASSPKCIQVERHVI
RPPPISPPPDSLPLDDGAAHVMHREVWMAVFSYLSHQNLCVCMRVCRTWNRWCCDKRLWT
RIDLNHCKSITPLMLSGIIRRQPVSLDLSWTNISKKQLSWLINRLPGLRDLVLSGCSWIA
VSALCSSSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDNRPGQMDNRSKLRNIVELRLAGL
DITDASLRLIIRHMPLLSKLHLSYCNHVTDHSINLLTAVGTTTRDSLTEINLSDCNKVTD
QCLSFFKRCGNICHIDLRYCKQVTKEGCEQFIAEMSVSVQFGQVEEKLLQKLS
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagagaaagactctggaagaagattgcgtgcgattgaccgccagagatacgac
gaaaacgaggacttgtcggacgtggaggaaatcgtcagcgtccgtggcttcagcctggag
gagaagctacatagccagctgtaccagggggacttcgtgcatgccatggagggcaaagat
tttaactatgagtacgtacagagagaagctctcagggttcccctggtttttcgagacaag
gatggactaggaatcaagatgccagaccctgatttcacagtcagagacgtcaaactcctt
gtggggagtcgccgactggtggatgtgatggacgtgaacacccagaagggtaccgagatg
agcatgtcccagtttgtgcgttactacgagaccccagaggcacagcgggacaaactctac
aatgtcatcagccttgagttcagccacacgaagctggagcacctggtcaagcgccccact
gtggtggacctggtggactgggtggacaacatgtggccccagcaccttaaggaaaagcag
acggaagccacaaacgcccttgcagagatgaagtaccccaaagtgaagaagtactgtctg
atgagtgtgaagggttgtttcactgacttccacattgacttcggaggtacctctgtgtgg
taccatgttttccgtggtgggaagatcttctggctgatccctccaaccctgcacaacttg
gcactgtatgaggagtgggtgctgtcaggcaaacaaagtgacatctttctgggagaccgc
gtggaacgatgccaaagaattgagctgaaacaaggctacacatttttcatcccttctggt
tggatccatgcagtatacacccctgtggactctctggtgttcggcgggaacatcctgcac
agcttcaacgtgcccatgcagctgcggatctacgagattgaggacagaacccgggttcag
cccaagttccgttaccccttctactatgaaatgtgctggtatgtcttggagagatatgtg
tactgtgtgacccagcgctcctacctcactcaggaataccagagagaatcaatgcttatt
gatgccccaaggaaaggcagtgtagacgacttctcatctgattcctggttggacatggag
gaggagtcctgtgagcagcagccccaggaggaagaggaaaaggaggaggaggaagaggag
gaaagggacggtgcagataaaacacccaagccaccctccgatggccccacctcacccacc
agcaccccctcagaggaacaggagcacacagggaagaagcccaaagcccctgccatgaga
ttcctcaagaggactttgtccaatgagtccgaggaaagtgtcaagtccacaacgatgccc
atagactaccccaagactcccacaggctccccttccactgagctctctaccaagtggacc
caccttaccgaatttgaactgaagggcctaaaagccttggtcgaaaaactagagtcgctt
ccggagaataagaagtgtgtccctgagggcatcgaggacccccaggccctcctggaaggt
gtaaagaacgtactgaaggaacatgtggatgacgaccctagcctggccatcactggggtc
cccgtggtcagctggccaaagaagactccaaagaaccgggtggtgggtcggcctaagggc
aagttgggcccagcctcagcggtgaagttggctgccaaccgaacaacagcaggagctcgc
aggcgccggacgcgatgccgcaagtgcgaggcctgcctgcggacggagtgcggagagtgt
catttttgcaaggatatgaagaaattcggaggccctgggcgcatgaagcagagctgcatc
atgcggcagtgcatcgcgccagtgctgccccacaccgccgtgtgccttgtgtgtggcgag
gcagggaaggaggacacagtggaagaggaagaaggcaagtttaacctcatgcttatggag
tgctccatctgcaacgagatcatccaccctggatgccttaagattaaggagtcagagggt
gtggtcaacgatgagcttcccaattgctgggagtgtccgaagtgtaaccacgctggcaag
accgggaaagcctacaacaagcaaaagcgtggccctggctttaagtatgcctccaacctg
cctggctccttgctcaaggagcagaagatgaaccgggacaacaaggaagggcaggagcct
gtcaagcggaggagtgagtgtgaagaggctccccgacgcaggtcagatgagcaccctaaa
aaggtgcctgcagatagcatcctacgccgaaagtctgatgatgtacacctaaggaggaaa
cggaaatatgagaagccccaagagctgagtggacgcaagcgagcctcgacgcttcaaacg
tcccccggttcttcctctcacctctcgccgaggccccctctaggcagcagtctcagccct
tggtggagatccagtctcacttacttccagcagcagctaaaacctggcaaagaagataag
cttttcaggaaaaagcggcggtcctggaagaacgctgaggatcggttggcactgaccaac
aaaccccttcggcgcttcaagcaggaaccagaggacgatctgcctgaggcacctcctaag
gcccgggagagtgaccagtcacggtccagctcacccaccgctgggcccagcactgaaggg
gctgaaggcccagaagagaagaaaaaggtgaagatgcgcctgaaacggcggcttcctaac
aaggagctgagcaaagagctaagcaaggagctcaaccacgagatccaaaaaacagagagt
accttggcccacgagacccaccagcccatcaagtcagagcctgaaagtgagaacgaggag
ccaaagaggcccctaagccactgcgagcgcccccaccgcttcagcaaggggctcaacggc
acccctcgggagctacggcacccactgggacctggcctgcgcagcccccctcgtgttaca
tcccggcccccaccctctgcgtcctcacctaagtgcatccaggtggagcgtcatgtgatc
cggccaccacccatcagccctccacctgactcgctgccccttgacgatggagcagcccat
gtcatgcacagggaggtgtggatggcagtcttcagctacctcagccaccaaaacctgtgt
gtctgcatgcgggtctgcagaacctggaaccgctggtgctgcgataagcggttgtggacc
cgcattgacctgaaccactgcaagtccatcacgcccctgatgctgagtggcatcatccgg
cgacagcctgtctcccttgacctcagctggaccaatatctccaagaagcaactgagttgg
ctcatcaaccggttgcctgggctccgggacttggtgctgtcaggctgctcatggattgct
gtctcagccctctgtagctccagttgtccattgctccggaccctggatgtccagtgggta
gaaggactaaaggatgcccagatgcgggatctcctgtccccacccacagacaacaggcca
ggtcagatggacaatcggagcaagctccggaacattgtagaactgcgcctcgctggcctg
gacatcacagatgcctccctgcggctcattatccgccatatgcccctgctctccaagctc
cacctcagttactgtaaccacgtcactgaccattccatcaacctgctcactgcagttggc
actaccacccgagactctctgacagagatcaacctatcagactgcaataaggtcactgac
cagtgcctgtccttcttcaaacgctgtggaaatatttgtcatattgacctgaggtattgc
aagcaagtcaccaaggaaggctgtgagcagttcatagccgaaatgtctgtgagtgttcaa
tttgggcaagttgaagagaaacttcttcaaaaactaagttag
DBGET
integrated database retrieval system
