KEGG   Microtus oregoni (creeping vole): 121454410
Entry
121454410         CDS       T08307                                 
Symbol
Smndc1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
morg  Microtus oregoni (creeping vole)
Pathway
morg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:morg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121454410 (Smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:morg03041]
    121454410 (Smndc1)
Spliceosome [BR:morg03041]
 Complex A
  U2 snRNP components
   U2 related factors
    121454410 (Smndc1)
 Complex B
    121454410 (Smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    121454410 (Smndc1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR
Other DBs
NCBI-GeneID: 121454410
NCBI-ProteinID: XP_041517664
LinkDB
Position
Unknown
AA seq 238 aa
MSEDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSETLAS
SDSFASTQPTHSWKVGDKCMAIWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLL
NLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQ
FNNRAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtccgaggatctagcaaaacagttggctagctacaaagcccaactccagcaagtagaa
gctgctctgtctggaaacggagaaaatgaagatctgttgaaattgaagaaggacttgcaa
gaagttatagaattgaccaaagaccttctgtcaactcagccttcggaaactcttgcaagt
tcagacagttttgcttctactcagcctactcattcatggaaagtaggggacaaatgtatg
gcaatctggagtgaagatggacagtgttacgaagcggagatcgaggagatagatgaagaa
aatggcaccgctgcaatcacctttgctggttatggcaatgctgaagtgactccgttgttg
aacctcaaacccgtagaagaaggaaggaaggcaaaagaggacagtggcaacaaacctatg
tcaaaaaaagaaatgattgcccagcaacgtgaatataaaaagaaaaaagctttgaaaaaa
gcacagagaataaaagaacttgagcaggaaagagaggaccagaaggtgaaatggcagcag
ttcaacaacagggcttattctaaaaacaaaaaaggccaggtgaagaggagtatttttgcc
tcgccggaaagtgtgacgggcaaagttggagtaggaacttgcgggattgctgacaagccg
atgacacagtatcaagacacatccaaatacaatgtcaggcatttgatgcctcaataa

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