Microtus oregoni (creeping vole): 121458250
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Entry
121458250 CDS
T08307
Symbol
Ddx58
Name
(RefSeq) antiviral innate immune response receptor RIG-I
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg04064
NF-kappa B signaling pathway
morg04622
RIG-I-like receptor signaling pathway
morg04623
Cytosolic DNA-sensing pathway
morg05160
Hepatitis C
morg05161
Hepatitis B
morg05162
Measles
morg05164
Influenza A
morg05168
Herpes simplex virus 1 infection
morg05169
Epstein-Barr virus infection
morg05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
121458250 (Ddx58)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
121458250 (Ddx58)
04623 Cytosolic DNA-sensing pathway
121458250 (Ddx58)
09160 Human Diseases
09172 Infectious disease: viral
05161 Hepatitis B
121458250 (Ddx58)
05160 Hepatitis C
121458250 (Ddx58)
05171 Coronavirus disease - COVID-19
121458250 (Ddx58)
05164 Influenza A
121458250 (Ddx58)
05162 Measles
121458250 (Ddx58)
05168 Herpes simplex virus 1 infection
121458250 (Ddx58)
05169 Epstein-Barr virus infection
121458250 (Ddx58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
morg04054
]
121458250 (Ddx58)
Enzymes [BR:
morg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
121458250 (Ddx58)
Pattern recognition receptors [BR:
morg04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
121458250 (Ddx58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARD_2
RIG-I_C
RIG-I_C-RD
DEAD
ResIII
Helicase_C
AAA_25
Motif
Other DBs
NCBI-GeneID:
121458250
NCBI-ProteinID:
XP_041523285
LinkDB
All DBs
Position
Unknown
AA seq
925 aa
AA seq
DB search
MTAEQRQNLQAFRDYVRKTLDPTYILSYMGPWLQDEVVQFIQAEKNNKGPMEAASLFLQY
LLQLQTEGWFRAFLDALYSAGYCGLYEAIESWDFQKLEKLEEHRLLLQRLQPEFKTRINP
TDILPELSECLINQECEEIKQICFTKGMMAGAEKMVECLLRSDKENWPKVLKLALEKENS
TFSELWIVEGFKMVESKAVEDDDTETSSIQIFIQEEPECQVLSQNPCTPSEAFSNNFNGP
LKPRNYQLELALPAEKGKNTIICAPTGCGKTFVSLLICEHHLKTSPHGGKGKVVFFANQI
PVYEQQATVFSRYFERLGYSVAGVSGATTDNVSMQDIIENKDIIILTPQILVNSLNDGTI
PSLSVFTLMIFDECHNTSKHHPYNQIMFRYLDHKLGGSPGPLPQVIGLTASVGVGDAKTV
EEAMLHICKLCAALDTSVIATVRDNLEELEQFVYKPQKFFRKVESRTTNTFKSIISQLMK
ETEGLAKNVSEELGKLFQIQNREFGTQRYEQWIVAVHKACMVFQMPDKEKESSICRALFL
YTSHLRKYNDALIISEHAQMKDALNYLKAFFQDVKNAAFDETEQDLTRRFEEKLEELEEI
SKDPSNENPKLRDLYLILQEEYHLKPETKTILFVKTRALVDALKKWIEENPALSFLKPGI
LTGRGKTNQATGMTLPAQKCALEAFRASGDNNILIATSVADEGIDIAQCNLVILYEYVGN
VIKMIQTRGRGRARDSKCFLLTSNADVIEKEKVNMFKEKIMNESISMLQTWDEMKFEKTV
QRIQLDEKFIRDSQRKPQPAPDKENKKLLCGKCKAFACYTADIRVVEKSHYTVLGNAFKE
RFVSKPHPKPKIYDSFEKKAKIFCAIQKCCHDWGIHVKYKTFEIPVIKIESFVVEDIASG
VQRRHAKWKDFHFERVQFDPAEMPI
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgaacagcggcagaatctgcaagcattcagagactatgtcaggaagactctg
gaccccacctacatcctcagctacatgggtccctggctccaggatgaggtggtccagttc
atccaggctgagaaaaacaacaagggccccatggaagctgcctccctgttcctccagtac
ctgctgcagctgcagacggaaggctggttccgggcctttttggatgccctgtacagtgca
ggttactgtggactttatgaagccatcgaaagttgggatttccaaaaacttgaaaagtta
gaggaacacagattacttttacagcgtttacagccagaatttaagaccagaatcaaccca
acagatatccttcctgaattgtctgaatgcttgattaatcaggaatgtgaagaaatcaaa
cagatctgcttcaccaaagggatgatggcaggtgcggagaagatggttgaatgtcttctc
agatcggataaggagaactggcccaaggttttgaaattggctttggagaaagaaaacagc
acgttcagtgaactgtggattgttgaaggtttcaaaatggttgaaagtaaagctgttgaa
gacgatgacacggagacgtccagcatacagattttcatacaagaggagccagaatgccag
gttctcagtcagaatccctgcactccttcagaagcattttctaataattttaatggcccg
ttgaaaccaagaaattaccaactagagcttgctctgcctgccgagaaagggaaaaataca
ataatatgcgctcctactggttgtgggaaaacctttgtgtcacttcttatatgtgagcat
catctgaaaacatcgccacatggaggaaaagggaaagtagtcttttttgctaatcaaatt
cctgtgtatgaacagcaggcaactgtgttctcacgctattttgaaagacttgggtacagc
gtagcgggcgtttccggggcaacgactgataatgtctcaatgcaggacattatcgagaac
aaagacatcatcatcctcacgccccagattcttgtgaacagtctcaacgatggaaccatc
ccctcgctgtctgtcttcaccctgatgatctttgacgaatgccataacaccagtaaacac
cacccgtacaatcagatcatgttccgatacctagatcacaaactcggagggtcgccaggc
ccactgcctcaggtcatcggactgactgcctcagtgggtgttggagatgccaaaactgta
gaggaagccatgctgcatatctgcaaactctgcgccgcccttgacacgtccgtgatcgcc
acggtcagagacaacttggaggaactggagcagtttgtttataaaccccagaaatttttc
aggaaggtggaatcacggactaccaacacatttaagtccatcatatctcagctgatgaag
gaaacagagggactggcaaagaatgtctccgaggaactcggaaaattatttcagattcaa
aacagagaatttggcacgcagagatacgagcagtggatcgtcgccgttcacaaagcctgc
atggtgtttcagatgccggacaaggagaaggagagcagcatttgcagagcgctctttctg
tacacgtcccatttgcggaaatacaatgatgctctcatcatcagtgagcatgcccagatg
aaagatgctcttaattacctcaaagccttcttccaagatgtcaaaaatgcagcatttgat
gagactgagcaagatcttacgcggaggtttgaagaaaagctggaggaactagaagaaatt
tccaaggatcccagcaacgagaatcctaaactcagagacctctacctgatcttacaagaa
gagtaccacctaaagccggagaccaaaaccattctttttgtgaaaaccagagcacttgtg
gatgctttaaagaaatggattgaagaaaatcctgcactcagctttctaaagcctggtata
ttgactggacgtggcaaaacaaaccaggcaacagggatgacactcccagcacagaagtgt
gcgctggaagcgttcagagccagcggggataacaacatcctaattgctacctcggtggct
gatgaaggcattgacatcgctcagtgcaacctggtcatcctatacgagtatgtgggcaac
gtcatcaaaatgatccaaaccagaggcaggggaagagcaagagacagcaagtgcttcctc
ctgaccagcaatgctgacgtcatcgagaaagaaaaggtgaacatgttcaaggaaaaaata
atgaatgaatccatttcaatgcttcagacgtgggatgaaatgaaatttgagaaaacggtt
caacgcatacagttggatgaaaagttcatcagagatagtcaacgcaagccacaaccggct
cctgataaggaaaataagaaactgctgtgtgggaaatgcaaggcctttgcgtgctacacg
gctgacatccgagtggtggagaaatcccactacaccgtgcttggaaatgcttttaaggag
cgctttgtgtctaagccgcaccctaagccaaagatctacgacagtttcgagaagaaagca
aagatattctgtgccatacagaagtgctgtcacgactgggggatccatgtgaaatataag
acgttcgaaattcccgtcataaaaatcgaaagttttgtggtggaagacatcgcaagtgga
gtccagaggcggcacgcaaagtggaaggactttcattttgaaagagtacagtttgaccct
gcagaaatgcccatatga
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integrated database retrieval system
