Moraxella sp. K23: MOXK23_05760
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Entry
MOXK23_05760 CDS
T10744
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
morx Moraxella sp. K23
Pathway
morx03030
DNA replication
morx03410
Base excision repair
morx03420
Nucleotide excision repair
morx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
morx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MOXK23_05760 (ligA)
03410 Base excision repair
MOXK23_05760 (ligA)
03420 Nucleotide excision repair
MOXK23_05760 (ligA)
03430 Mismatch repair
MOXK23_05760 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
morx03032
]
MOXK23_05760 (ligA)
03400 DNA repair and recombination proteins [BR:
morx03400
]
MOXK23_05760 (ligA)
Enzymes [BR:
morx01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MOXK23_05760 (ligA)
DNA replication proteins [BR:
morx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MOXK23_05760 (ligA)
DNA repair and recombination proteins [BR:
morx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MOXK23_05760 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MOXK23_05760 (ligA)
MMR (mismatch excision repair)
DNA ligase
MOXK23_05760 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MOXK23_05760 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
DNA_ligase_ZBD
Nlig-Ia
PTCB-BRCT
HHH
5_3_exonuc
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
BFN01462
LinkDB
All DBs
Position
669835..671862
Genome browser
AA seq
675 aa
AA seq
DB search
MIMNTDAITAQMRKLIAQLKQHNHAYYVLDNPLLEDSEYDQLRQELVALETAYPELVQSD
SPTNQVGDKPLPFFTQVTHQIPMLSLGNLFTFDDLQNFMRRVNDRLADNQQNPEYEVELK
LDGLAVSLLYQNGQFTQAVTRGDGQTGEDITQNVRTIRNLPLQLAIDIPRLEVRGEVLMP
KAGFAKLNRDAQAKGEKTFANPRNAAAGSLRQLDPNIAKSRPLAFYAYSVNQGLPAEITT
QSDALFWLKALGFSISDIKIVQTAAQLQAYYQAVIEKRSHLPFEIDGTVIKVNSLALQEQ
LGFLSREPRWATAYKFPAETVMTRLNAIEWQVGRTGQLTPVGKLEPVNVGGVTVSNVTLH
NIGEIQRLDIRAGDMVSVHRAGDVIPKVTRVWTDERPANAQVVSLPTHCPVCDSPVIMPE
GEALARCTGGLFCPAQQQEALIHFVSRKAMDIDGLGERWLINFFEQGIVKNVADIYALSK
HRDALINLEKLGEKSVENMLAAIEKSKDTTLPRFIFALGIGGVGESTAMNLAMQFGDLQP
LMAASIEALQKTPDVGEKTADSIFEFFRAEHNIEVINRLLQAGIHWQPVSQVPEGNQPLK
GQSWVITGTLESMGRDEAKAKLQALGAKVSGSVSAKTTALLAGEKAGSKLANAEKLGVKV
VTEAQFTDLLNTYHA
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgattatgaacacagacgctattactgcgcaaatgcgcaaactcattgcacagctaaaa
caacataaccacgcttactatgtcctagataatccgctgttagaagatagcgaatacgac
caacttcgccaagaactggtggcactagaaaccgcgtatcctgaattggtacaaagcgat
agccctaccaaccaagtaggtgacaagccgttgccgttttttacccaagtcacccaccaa
atacccatgctgtcactgggtaatttatttacttttgatgatttacagaactttatgcga
cgggtcaatgaccgtttggcagacaatcagcaaaaccctgaatatgaagtcgagctcaaa
cttgacgggcttgcggtttcactgttgtaccaaaacggacaatttacccaagcggtcacg
cgcggcgatggtcaaacaggcgaagatattacccaaaacgtgcgtactattcgaaatcta
cccctacagctagcgattgatataccacggctagaagtgcgcggcgaagtactcatgccc
aaagcagggtttgccaagctcaatcgtgatgcacaggcgaaaggggagaaaacctttgcc
aatccgcgtaacgccgctgcgggaagtttgcgccaacttgacccaaatatcgccaaaagt
cgtccactggcgttttatgcctattccgtcaatcaaggcttacccgctgagattaccacc
caatccgatgcgcttttttggctaaaagcgttgggctttagcattagcgatatcaaaatc
gtgcaaacagccgcgcagctgcaagcgtattatcaagcggtgattgaaaaacgcagtcac
ttaccctttgaaattgatggcacggtgattaaggtcaatagtttagccttgcaagagcaa
ctgggctttttaagccgtgagccacgctgggcaaccgcctataaattccctgccgaaact
gtgatgacgcgtctaaatgcgattgagtggcaagttgggcgcacaggtcagttgacgcct
gtgggcaaacttgaacctgtcaatgtcggtggcgtcactgtgagcaatgtgaccctgcat
aatatcggtgaaattcagcgtttagacattcgagcaggggacatggtcagcgtacaccgt
gccggtgatgtcatacccaaagttacgcgcgtttggacggacgagcgccccgccaatgcc
caagtggtgagcctgccgacgcattgcccggtgtgtgattcacccgttatcatgccagaa
ggtgaagcgctggcacgatgtaccggcgggttattttgcccagcccagcaacaagaagcg
ctgattcactttgtcagtcgtaaagcgatggatatcgacgggcttggtgagcgctggttg
attaacttttttgagcaaggtattgttaaaaatgtcgcagatatttatgcgctgagcaag
caccgcgatgcgctcatcaaccttgaaaaattaggggaaaaatctgtcgaaaatatgcta
gccgccattgaaaaaagtaaagatacgaccttaccgcggtttatttttgccttgggtatt
ggtggcgtaggcgagagcacggcgatgaatttagccatgcaatttggcgacttgcagccg
ctcatggcagcgagtattgaagccttacaaaaaacccccgatgtcggtgaaaaaaccgca
gactcgatttttgagttttttcgtgccgagcacaatatcgaagtcattaatcgactatta
caagcgggtattcattggcagcctgtcagccaagtgcctgaaggtaatcagccgcttaaa
ggtcaaagttgggtcattacaggcacccttgaaagcatgggacgtgacgaagccaaagcc
aaactgcaagcattaggggcaaaagtctcaggcagcgtttctgccaagaccaccgcactg
ctcgcaggcgaaaaagcgggcagtaaacttgccaatgctgaaaaactgggggtgaaagtg
gtgactgaagcgcaattcaccgatttattgaacacgtatcatgcctaa
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integrated database retrieval system
