KEGG   Moraxella sp. DOX410: RNZ41_03420
Entry
RNZ41_03420       CDS       T10479                                 
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
mow  Moraxella sp. DOX410
Pathway
mow03030  DNA replication
mow03410  Base excision repair
mow03420  Nucleotide excision repair
mow03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mow00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RNZ41_03420 (ligA)
   03410 Base excision repair
    RNZ41_03420 (ligA)
   03420 Nucleotide excision repair
    RNZ41_03420 (ligA)
   03430 Mismatch repair
    RNZ41_03420 (ligA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mow03032]
    RNZ41_03420 (ligA)
   03400 DNA repair and recombination proteins [BR:mow03400]
    RNZ41_03420 (ligA)
Enzymes [BR:mow01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     RNZ41_03420 (ligA)
DNA replication proteins [BR:mow03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     RNZ41_03420 (ligA)
DNA repair and recombination proteins [BR:mow03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     RNZ41_03420 (ligA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     RNZ41_03420 (ligA)
   MMR (mismatch excision repair)
    DNA ligase
     RNZ41_03420 (ligA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      RNZ41_03420 (ligA)
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 DNA_ligase_ZBD Nlig-Ia PTCB-BRCT HHH 5_3_exonuc RNA_ligase
Other DBs
NCBI-ProteinID: WNP28149
UniProt: A0AA96KZK3
LinkDB
Position
746262..748283
AA seq 673 aa
MNTAAITAQMRKLITQLKQHNHAYYVLDNPLLEDSEYDQLRQELVALETAHPELVQSDSP
TNQVGDKPLPFFTQVTHQIPMLSLGNLFTFDDLQNFMRRVNDRLADNQQNPEYEVELKLD
GLAVSLLYQNGQFIQAVTRGDGQTGEDITQNVRTIRNLPLQLPIDIPRLEVRGEVLMPKA
GFARLNRDAQAKGEKTFANPRNAAAGSLRQLDPNIAKSRPLAFYAYSVNQGLPAEITTQS
DALFWLKALGFSISDIKIVQTAAQLQAYYLSVIEKRSRLPFEIDGTVIKVNSLALQEQLG
FLSREPRWATAYKFPAETVMTRLNAIEWQVGRTGQLTPVGKLEPVNVGGVTVSNVTLHNI
GEIQRLDIRAGDMVSVHRAGDVIPKVTRVWTDERPANAQVVSLPTHCPVCDSPVIMPEGE
ALARCTGGLFCPAQQQEALIHFVSRKAMDIDGLGERWLINFFEQGIVKNVADIYALNNHR
DALINLEKLGEKSVENMLAAIEKSKDTTLPRFIFALGIGGVGESTAMNLAMQFGDLQPLM
AASIEALQKTPDVGEKTADSIFEFFRAEHNIEVINRLLQAGIHWQPVSPVPEGNQPLKGQ
SWVITGTLEGMGRDEAKAKLQSLGAKVSGSVSAKTTALLAGEKAGSKLANAEKLGVKVVT
EAQFTDLLNSYHA
NT seq 2022 nt   +upstreamnt  +downstreamnt
atgaatacagccgctattactgcgcaaatgcgcaaactcattacacagctaaaacaacat
aaccacgcttattatgttctagataatccgctgttggaagatagcgaatacgaccaactt
cgccaagaactggtggcactagaaaccgcccatcctgaattggtacaaagcgatagccct
accaaccaagtaggtgacaagccgttgccgttttttacccaagtcacccaccaaataccc
atgctgtcactgggtaatttatttacttttgatgatttacagaactttatgcgacgggtc
aatgatcgtttggcagacaatcagcaaaaccccgaatatgaagtcgagctcaaacttgac
gggcttgcggtttcactgttgtaccaaaacgggcaatttatccaagcggtcacgcgcggc
gatggtcaaacgggcgaagatattacccaaaatgtgcgtactattcgaaatctaccgctg
cagttgccgattgatataccgcgcttagaagtgcgcggcgaagtactcatgcccaaagca
gggtttgcaaggctcaaccgtgatgcccaagcaaaaggggagaaaacctttgccaatccg
cgtaacgctgccgcaggaagtttgcgccagcttgatcccaatatcgccaaaagtcgtccg
ctggcgttttatgcctattccgtcaatcaaggcttgcccgctgagattaccacccaatcc
gatgcgcttttttggctaaaagcgttgggctttagcattagcgatatcaaaatcgtgcaa
acagccgcgcaactacaagcgtattatctatcggtgattgaaaaacgcagtcgcttaccc
tttgaaattgatggcacggtgattaaggtcaatagtttagccttgcaagagcaattaggc
tttttaagccgtgagccacgttgggcaactgcgtataaattccctgccgaaactgtcatg
acccgcttaaatgcgattgaatggcaagtagggcgcacaggtcagttgacgcccgtgggc
aagcttgaacctgtcaatgtcggtggcgtcacggtgagcaatgtgaccctgcataatatc
ggtgaaattcagcgtttagatatccgagcaggggacatggtcagcgtacaccgtgccggt
gatgtcattcccaaagttacgcgcgtttggacggacgagcgccctgccaatgcccaagtg
gtgagcctgccgacgcattgcccggtgtgtgattcacccgttatcatgccagaaggtgaa
gcgctggcacgatgcaccggcgggctattttgcccagcccagcaacaagaagcactgatt
cattttgtcagtcgtaaagcgatggatatcgatgggctcggtgaacgctggttgattaac
ttttttgagcaaggtattgttaaaaatgtcgcagatatttatgcgcttaacaatcaccgc
gatgcgctcatcaaccttgaaaaattgggggaaaaatctgtcgaaaatatgctggctgcc
attgaaaaaagtaaagatacgaccttaccgcggtttatctttgccttgggtattggtggc
gtgggtgagagcacagcgatgaatttagccatgcaatttggcgacttgcagccgctcatg
gcagcgagtatcgaagccttacaaaaaacccccgatgtcggtgaaaaaaccgcagactcg
atttttgagttttttcgtgccgagcacaatatcgaagtcatcaatcgattattacaagcc
ggtattcattggcagcctgtcagcccagtgcctgaaggcaatcagccgcttaaaggtcaa
agttgggtcattacaggcacgcttgaaggcatgggacgtgatgaagccaaggccaaactg
caatcattaggggcaaaagtctcaggcagtgtttctgccaagaccaccgcactgctcgca
ggcgaaaaagcgggcagtaaacttgccaatgccgaaaaactgggggtaaaagtggtcact
gaagcgcaattcaccgatttattaaacagttatcatgcttaa

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