Candidatus Methylomirabilis oxygeniifera: DAMO_2147
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Entry
DAMO_2147 CDS
T02155
Symbol
nth
Name
(GenBank) Endonuclease III (DNA-(apurinic or apyrimidinic site) lyase)
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
mox
Candidatus Methylomirabilis oxygeniifera
Pathway
mox03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DAMO_2147 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mox03400
]
DAMO_2147 (nth)
Enzymes [BR:
mox01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DAMO_2147 (nth)
DNA repair and recombination proteins [BR:
mox03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DAMO_2147 (nth)
Prokaryotic type
DAMO_2147 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
CBE69197
UniProt:
D5MHG5
LinkDB
All DBs
Position
1861054..1861728
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AA seq
224 aa
AA seq
DB search
MVTLRPAKGDIRTATPATAKKILTILEETYPDAHVTLDFENPFQLLIATILAAQCTDERV
NQVTKGLFERYPTPKAFAEADPVELEEAIRSTGFYRNKARSIIGCCKKLVEEFGGQVPQT
MEELITLSGVWRKTANIVLGNALGITAGIAVDTHVIRVANRLGLAQSDKPDEIEQQLCRI
IPKEKWIPLTHLLVFHGRRICMARKPDCPRCPVRHLCPWPDKTL
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atggtcacgttgagaccggcaaaaggcgatattcgtactgccacccctgccaccgcgaaa
aagatcctcaccattcttgaggagacctaccccgatgcgcatgtgacgctggacttcgag
aacccgttccaattgctgatcgccacgatcctggcggcccagtgtaccgacgagcgggtg
aatcaggtcacgaaggggctgttcgaacggtatccgacaccgaaggcgtttgctgaggcc
gatccggtcgagttggaggaggcgatccgatcgacgggattttaccgcaacaaggccagg
agcatcatcggctgctgcaagaaactggtcgaggagttcggcggtcaggtgccgcagacc
atggaggagctcatcacgctgtcaggcgtctggcgcaaaaccgccaacatcgtcctgggc
aatgccctgggcatcactgccgggatcgcggtggacactcatgtcatacgggtagccaac
cgtctgggcctggcacaaagcgacaagccggatgagatcgagcaacagctctgccggatc
atccctaaggaaaagtggatccccttgactcacctgctcgtcttccacggtcggcgcatc
tgcatggccaggaaaccagattgcccccgctgccccgtccgccacctctgcccctggccc
gacaaaactctctaa
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