Microbulbifer pacificus: R5R33_03570
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Entry
R5R33_03570 CDS
T09537
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
mpaf
Microbulbifer pacificus
Pathway
mpaf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mpaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
R5R33_03570 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpaf03400
]
R5R33_03570 (nth)
Enzymes [BR:
mpaf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
R5R33_03570 (nth)
DNA repair and recombination proteins [BR:
mpaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
R5R33_03570 (nth)
Prokaryotic type
R5R33_03570 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
DUF2400
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
WOX06220
UniProt:
A0AAU0N0C4
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All DBs
Position
790030..790698
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AA seq
222 aa
AA seq
DB search
MMVKNLLKQERVDYIQNRLEELYPETPVPLDHFDAYSLLIAVLLSAQCTDERVNQVTPGL
WKLADNPHDMAQVPVEKIREAIRPCGLSPQKSKAIQKLSEILVNQYHGKVPENMAALETL
PGVGHKTASVVMSQAFGHPAFPVDTHIHRLAQRWGLTSGKNVVQTEKDLKRLFPEDKWNK
LHLQIIFYGREFCSARGCDGTVCEICTTCYPARKNPKKVKKA
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgatggtaaaaaacctactcaaacaggaacgggtggactacatccagaatcggctcgag
gaactctatccggagacgccggtccccctcgaccacttcgatgcctactccctgctaata
gcggttctgctgtccgcgcagtgtaccgacgagcgggtaaaccaggtgaccccgggactg
tggaagctcgcggataatccccacgacatggcgcaggtgccggtggagaaaatccgcgag
gcgatccgcccctgcggcctgtcgccgcaaaaatcaaaggcgatccagaagctctcggaa
attctggtgaaccagtaccacggcaaggtaccggaaaatatggcggcactggaaacattg
ccgggcgtgggacacaaaaccgcgagcgtggtgatgtcccaggccttcggtcacccggcc
tttccggtggacacccacatccaccgcctggcccagcgttgggggctcacctctggcaaa
aacgtggtgcagacggaaaaggatctgaagcggctgttcccggaagacaagtggaacaaa
ctgcacctgcagatcattttttacggccgtgaattctgttctgcacgcggctgcgatggc
accgtgtgcgagatctgcaccacctgctacccagcgcgcaagaatccgaaaaaagtcaaa
aaggcctga
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