KEGG   Mus pahari (shrew mouse): 110316423
Entry
110316423         CDS       T05929                                 
Symbol
Cxcl12
Name
(RefSeq) stromal cell-derived factor 1 isoform X1
  KO
K10031  C-X-C motif chemokine 12
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah04060  Cytokine-cytokine receptor interaction
mpah04061  Viral protein interaction with cytokine and cytokine receptor
mpah04062  Chemokine signaling pathway
mpah04064  NF-kappa B signaling pathway
mpah04360  Axon guidance
mpah04670  Leukocyte transendothelial migration
mpah04672  Intestinal immune network for IgA production
mpah04810  Regulation of actin cytoskeleton
mpah05163  Human cytomegalovirus infection
mpah05200  Pathways in cancer
mpah05323  Rheumatoid arthritis
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    110316423 (Cxcl12)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    110316423 (Cxcl12)
   04061 Viral protein interaction with cytokine and cytokine receptor
    110316423 (Cxcl12)
 09140 Cellular Processes
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    110316423 (Cxcl12)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    110316423 (Cxcl12)
   04672 Intestinal immune network for IgA production
    110316423 (Cxcl12)
   04062 Chemokine signaling pathway
    110316423 (Cxcl12)
  09158 Development and regeneration
   04360 Axon guidance
    110316423 (Cxcl12)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    110316423 (Cxcl12)
  09172 Infectious disease: viral
   05163 Human cytomegalovirus infection
    110316423 (Cxcl12)
  09163 Immune disease
   05323 Rheumatoid arthritis
    110316423 (Cxcl12)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:mpah04052]
    110316423 (Cxcl12)
   00536 Glycosaminoglycan binding proteins [BR:mpah00536]
    110316423 (Cxcl12)
Cytokines and neuropeptides [BR:mpah04052]
 Cytokines
  Chemokines
   110316423 (Cxcl12)
Glycosaminoglycan binding proteins [BR:mpah00536]
 Heparan sulfate / Heparin
  Chemokines
   110316423 (Cxcl12)
SSDB
Motif
Pfam: IL8
Other DBs
NCBI-GeneID: 110316423
NCBI-ProteinID: XP_021046382
Ensembl: MGP_PahariEiJ_G0022531
LinkDB
Position
2:132788482..132801355
AA seq 119 aa
MDAKVVAVLALVLAALCISDGKPVSLSYRCPCRFFESHIARANVKHLKILNTPNCALQIV
ARLKNNNRQVCIDPKLKWIQEYLEKALNKGRREEKVGKKEKIGKKKRQKKRKAAQKRKN
NT seq 360 nt   +upstreamnt  +downstreamnt
atggacgccaaggtcgtcgccgtgctggccctggtgctggccgcgctctgcatcagtgac
ggtaaaccagtcagcctgagctaccgatgcccctgccggttcttcgagagccacatcgcc
agagccaacgtcaagcatctgaaaatcctcaacactccaaactgtgcccttcagattgtt
gcgaggctgaagaacaacaacagacaagtgtgcattgacccgaaattaaagtggatccaa
gagtacctggagaaagctttaaacaaggggcgcagagaagaaaaagtggggaaaaaagaa
aagataggaaaaaagaagcgacagaagaagagaaaggctgcccagaaaaggaaaaactag

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