KEGG   Mus pahari (shrew mouse): 110317092
Entry
110317092         CDS       T05929                                 
Symbol
Ift122
Name
(RefSeq) intraflagellar transport protein 122 homolog isoform X1
  KO
K19656  intraflagellar transport protein 122
Organism
mpah  Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:mpah03037]
    110317092 (Ift122)
Cilium and associated proteins [BR:mpah03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   110317092 (Ift122)
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_IFT122_2nd Zn_ribbon_IFT122 WD40 Zn_ribbon_IFT122_C Beta-prop_EML_2 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz EIF3I ANAPC4_WD40 WDR55 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 NBCH_WD40 Beta-prop_NUP159_NUP214 TPR_GEMI5 WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EML TPR_IF140-IFT172 Beta-prop_WDR35_TULP_N TPR_IFT80_172 Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_Vps41 eIF2A B-prop_COPA_B_2nd WD40_MABP1-WDR62_1st TPR_7 TPR_COPA_B Beta-prop_IFT140_2nd Beta-prop_WDR75_1st Beta-prop_SPT8
Other DBs
NCBI-GeneID: 110317092
NCBI-ProteinID: XP_021047129
Ensembl: MGP_PahariEiJ_G0022512
LinkDB
Position
2:131555988..131623258
AA seq 1183 aa
MRAVLTWRDKAEQCIYDLAFKPDGTQLILAAGNRLLVYDTSDGTLLQPLKGHKDTVYCVA
YAKDGKRFASGSADKSIIIWTSKLEGILKYTHNDSIQCVSYNPVTHQLASCSSSDFGLWS
PEQKSVSKHKSSSKITCCSWTNDGQYLALGMANGIISIRNKNGEEKVKIERPGGSLSPIW
SICWSPSREEHNDILAVADWGQKLSFYQLSGKQIGKDRPLNFDPCCISYFTKGEYILVGG
SDKQVSLFTKDGVRLGTVGEQNSWVWTCRVKPDSNYVVVGCQDGTISFYQLIFSTVHGLY
KDRYAYRDSMTDVIVQHLITEQKVRIKCRELVKKIAIYKNRLAIQLPEKILIYELYSEDS
ADMHYRVKEKIVKKFECNLLVVCADHIILCQEKRLQCLSFSGVKEREWQMESLIRYIKVI
GGPAGREGLLVGLKNGQILKIFVDNLFAIVLLKQATAVRCLDMSASRNKLAVVDENDTCL
VYDIHTKELLFQEPNANSVAWNTQCEDMLCFSGGGYLNIKASTFPVHQQKLQGFVVGYNG
SKIFCLHVFSMSAVEVPQSAPMYQYLDRKMFKEAYQIACLGVTDTDWRELAMEALEGLEF
ETAKKAFTRVQDLRYLELISSIEERKKRGETNSDLFLADVFSYQGKFHEAAKLYKRSGHE
NLALDMYTDLCMFEYAKDFLGSGDPKETKMLITKQADWARNINEPKAAVEMYISAGEHAK
AIEISGSHGWVDMLIDIARKLDKAEREPLLMCACYFKKLDSPGYAAETYLKIGDLKSLVQ
LYVDTKRWDEAFALGEKHPEFKDDIYVPYAQWLAENDRFEEAQKAFHKAGRQGEAVRVLE
QLTHNAVVESRFNDAAYYYWMLSMQCLDMAQVDPAQKDVMLDKFHHFQHLAELYHGYQTI
HRYTEEPFSFDLPETLFNISRFLLHSLTKATPLGISKVNTLFTLAKQSKALGAYKLARHA
YDKLRGLQIPARIQKSIELGTLTIRSKPFHDSEELVPLCYRCSTNNPLLNNLGNVCINCR
QPFIFSASSYEVLHLVEFYLEEGITDEEAVALIDLEAPRHKREGKWRETSSNNSQTLKLD
ETMDSIGEDDPFTAKLSFEQGSSEFVPVVVNRSVLRSMSRRDVLIKRWPPPLQWQYFRSL
LPDASITMCPSCFQMFHSEDYELLVLQHACCPYCRRRIDDTGP
NT seq 3552 nt   +upstreamnt  +downstreamnt
atgagggccgtgttgacgtggagagacaaagcggagcagtgtatctacgacctcgcattt
aagcctgatggaacgcaactgattctggctgcaggaaacagattgctggtttatgacacc
tctgatggcaccttacttcagcccctgaagggacacaaagacaccgtgtactgtgtggcg
tatgcaaaggatggcaagcgctttgcatctggatctgccgacaagagcatcattatctgg
acctcaaaacttgaaggcattctgaagtacacgcacaatgattctatacagtgtgtctcc
tacaatcctgttacccaccagctggcatcttgttcctccagtgactttgggttgtggtct
cctgagcagaagtctgtctccaagcacaaatccagcagcaagatcacgtgctgcagctgg
acaaacgatggtcagtacctggctctgggcatggccaatggcatcatcagcatacggaac
aagaatggtgaagagaaagtgaagatcgagcgccctgggggctccctctccccaatatgg
tccatctgctggagcccttcaagagaggaacataatgacatcctggctgtagctgactgg
ggacagaaactttccttctaccagctgagtggaaaacagattgggaaggatcgaccactg
aactttgacccctgctgcatcagctacttcactaaaggagagtacattttggtggggggt
tcagataagcaggtatctctcttcaccaaggatggagtgcgactggggactgttggggag
cagaactcctgggtgtggacctgtagagtaaaacctgactccaattatgtggtggttggc
tgccaggatggcaccatctccttctaccagctcatcttcagcacagtccatgggctctac
aaggatcggtatgcctacagggacagtatgacagatgtcatcgtgcaacacctcatcaca
gagcagaaagttaggattaagtgcagagagcttgtcaagaaaattgccatctacaaaaat
cgattagctatccagctgccagagaagatccttatctatgagctgtactccgaagactcg
gcagacatgcactaccgggtaaaggagaaaattgtcaagaagtttgagtgcaacctgctg
gtggtgtgtgccgatcacatcatcctgtgccaggagaaacggctacagtgcctgtccttc
agtggagtgaaggagagggaatggcagatggaatctctcatccgctacatcaaggtgatc
ggcggccctgctggaagagaaggtctattggtaggcctgaaaaacggccagatcctgaag
atctttgtggacaatctttttgctattgtcctgctgaagcaggccacagccgtgcgctgc
ttggacatgagtgcctcccggaacaagctggctgtggtggatgaaaatgacacatgcctg
gtatacgacatccacacgaaggagctgcttttccaggaaccgaacgccaacagcgtggcc
tggaacacgcagtgtgaggacatgctctgcttctctggaggaggctacctcaacatcaag
gccagcaccttcccagtgcaccagcagaagctgcagggcttcgtggttggctacaacggc
tccaagatcttctgccttcatgtcttctctatgtctgccgtggaggtgccacagtctgct
ccgatgtaccagtacctcgataggaagatgttcaaagaagcataccagatcgcttgcttg
ggagtgacagacactgattggcgtgaactggccatggaagctctagaaggactagagttt
gagacggcaaagaaggccttcaccagagtccaggaccttcgatacctagaactgatcagc
agtattgaggagaggaagaagaggggagagaccaacagtgacctgtttctggcagatgtg
ttttcctaccaagggaagttccatgaagccgccaaactgtacaagaggagcgggcatgag
aacctcgctctcgacatgtatactgacctctgcatgtttgagtacgccaaggatttcctt
gggtctggagaccctaaagaaacgaagatgctcatcaccaagcaggccgactgggccaga
aacatcaatgagcccaaagctgcagtggagatgtacatctcagcaggggagcatgccaag
gccatagagatcagtggcagccatggctgggtggacatgttgatagacattgctcggaag
ctggacaaggcagagcgggagcccctgctcatgtgcgcttgctactttaagaagctggac
agtcctggctatgctgctgagacctacctgaagatcggggacctgaagtctctggtgcag
ctgtacgtggacaccaagcgctgggatgaggcctttgcgttaggtgagaagcaccctgag
ttcaaggatgacatctacgtgccctacgcacagtggctggcggagaatgaccgatttgag
gaagcccagaaagccttccacaaggccgggaggcagggagaagcagtccgggtgctggag
cagctcacacacaatgctgtggtggagagcaggtttaacgacgctgcctattattactgg
atgctgtccatgcagtgcctcgacatggctcaagtagatcctgcccagaaggacgtgatg
ctggacaagttccaccactttcagcatctggctgagctgtaccatggctaccaaaccatt
caccgatacacggaggagccattcagctttgacctccccgaaaccctcttcaacatctcc
aggttcttgctgcacagcctgaccaaggccacccccttgggcatctccaaagtgaataca
ctcttcacactggctaagcagagcaaggctctgggtgcttataagctggcccggcatgcc
tatgacaagctacgggggctacagatccccgccaggatccagaagtccattgagctgggc
accctgaccatccgctccaagcccttccatgacagtgaggagctggtacccttgtgctac
cgctgttctaccaacaacccgctgctgaacaaccttggcaacgtctgcatcaactgccgc
cagcccttcatcttttctgcctcttcctatgaggtgctgcacctggtggaattctacctg
gaagaggggatcactgacgaagaagctgttgccctcatcgacctggaggcaccaagacac
aagagggagggcaagtggcgagagacctcaagcaacaattcccagacgttaaagctggat
gagaccatggactccataggagaggatgacccatttacagccaagctgagctttgagcaa
ggtagctctgagtttgtgcctgtggtggtgaaccggtcagtactacgctccatgagccga
agggatgttctcatcaagcgctggcccccgcccctgcagtggcagtatttccgctcgctg
ttgcctgatgcctccatcaccatgtgcccctcctgctttcagatgttccattcagaggac
tatgagctgcttgtgctccagcacgcctgctgcccttactgccgaaggcgcatcgacgac
actggcccctga

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