KEGG   Mus pahari (shrew mouse): 110318089
Entry
110318089         CDS       T05929                                 
Symbol
Bdnf
Name
(RefSeq) LOW QUALITY PROTEIN: brain-derived neurotrophic factor
  KO
K04355  brain-derived neurotrophic factor
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah04010  MAPK signaling pathway
mpah04014  Ras signaling pathway
mpah04024  cAMP signaling pathway
mpah04151  PI3K-Akt signaling pathway
mpah04722  Neurotrophin signaling pathway
mpah05016  Huntington disease
mpah05022  Pathways of neurodegeneration - multiple diseases
mpah05030  Cocaine addiction
mpah05034  Alcoholism
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    110318089 (Bdnf)
   04014 Ras signaling pathway
    110318089 (Bdnf)
   04024 cAMP signaling pathway
    110318089 (Bdnf)
   04151 PI3K-Akt signaling pathway
    110318089 (Bdnf)
 09150 Organismal Systems
  09156 Nervous system
   04722 Neurotrophin signaling pathway
    110318089 (Bdnf)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    110318089 (Bdnf)
   05022 Pathways of neurodegeneration - multiple diseases
    110318089 (Bdnf)
  09165 Substance dependence
   05030 Cocaine addiction
    110318089 (Bdnf)
   05034 Alcoholism
    110318089 (Bdnf)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:mpah04052]
    110318089 (Bdnf)
Cytokines and neuropeptides [BR:mpah04052]
 Cytokines
  Growth factors (RTK binding)
   110318089 (Bdnf)
SSDB
Motif
Pfam: NGF NTF3_N Spaetzle
Other DBs
NCBI-GeneID: 110318089
NCBI-ProteinID: XP_021048488
LinkDB
Position
3:93588538..93619413
AA seq 362 aa
MSDPSAWLWLSSGCPSLLLCRGAPAGWLSHGSQCAQDSWAWRRKSPGAARHLCLGGFDET
RFLQXATAALEQTRKRTGPRAGRRDQKRDNNVTPLPGIRELCVDPEFHQVRRVMTILFLT
MVISYFGCMKAAPMKEVNVHGQGNLAYPGVRTHGTLESVNGPRAGSRGLTTTSLADTFEH
VIEELLDEDQKVRPNEENHKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAANMSMR
VRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQYFYETK
CNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCTLTIKR
GR
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgtctgaccccagtgcctggctctggctgagctctgggtgcccgtcgttgctgctgtgc
aggggcgcacccgctggctggctgtcgcacggttcccagtgcgcccaggactcctgggct
tggagaaggaaatcgcctggggcggcgcgccacctctgcctgggaggctttgatgagacc
cggttccttcaanctgctaccgctgccttggagcagacgagaaagcgcacggggcccaga
gcagggcgcagggaccagaagcgtgacaacaatgtgactccactgccggggatccgagag
ctttgtgtggaccctgagttccaccaggtgagaagagtgatgaccatccttttccttact
atggttatttcatacttcggttgcatgaaggcggcgcccatgaaagaagtaaacgtccac
ggacaaggcaacttggcctacccaggtgtgcggacccatgggactctggagagcgtgaat
gggcccagggcaggttcgagaggcctgacgacgacgtcactggctgacacttttgagcac
gtcatcgaagagctgctggatgaggaccagaaggttcggcccaacgaagaaaaccataag
gacgcggacttgtacacttcccgggtgatgctcagcagtcaagtgcctttggagcctcct
ctactctttctgttggaggaatacaaaaattacctggatgccgcaaacatgtctatgagg
gttcggcgccactccgaccctgcccgccgtggggagctgagcgtgtgtgacagtattagc
gagtgggtcacagcggcagataaaaagactgcagtggacatgtctggtgggacggtcaca
gtcctagagaaagtcccggtatccaaaggccaactgaagcagtatttctacgagaccaag
tgtaatcccatgggttacaccaaggaaggctgcaggggcatagacaaaaggcactggaac
tcgcaatgccgaactacccaatcgtatgttcgggcccttactatggatagcaaaaagaga
attggctggcgattcataaggatagacacttcctgtgtatgtacactgaccattaaaagg
ggaagatag

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