Mus pahari (shrew mouse): 110320557
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Entry
110320557 CDS
T05929
Symbol
Nup210l
Name
(RefSeq) nuclear pore membrane glycoprotein 210-like
KO
K14314
nuclear pore complex protein Nup210
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03013
Nucleocytoplasmic transport
mpah05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110320557 (Nup210l)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
110320557 (Nup210l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpah03019
]
110320557 (Nup210l)
Messenger RNA biogenesis [BR:
mpah03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110320557 (Nup210l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_2
Motif
Other DBs
NCBI-GeneID:
110320557
NCBI-ProteinID:
XP_021052289
Ensembl:
MGP_PahariEiJ_G0026669
LinkDB
All DBs
Position
4:80564833..80673470
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AA seq
1881 aa
AA seq
DB search
MIAFGAPRPRSFGLLFSLTPHHFFLFLIGTLANKLNVPQVLLPFSREPGRVPFLLEAQRG
CYIWHSTHHDAVTIQPLYENGTSCSQRAVLVAESTQPIRLSSIILAREVVTDHELRCDVK
VDVIDNIEIVSRTRELYVDDAPLELMVRALDSKGNTFSTLAGMVFEWSIAQDNESSREEL
SSKIRILKYSEAEYSPPDYIIEMEKEERQGDVILVSGMRTGAAVVKVRIYEPFYKKVAAA
LIRLLVLENIFLIPSHDTYLLVGAYIKYRVAKMVQGRMTEVKFPLEHYTLELQDHRFTND
GLPSRTVALLDEKTATVTAVQLGQTNLVFVHKNVHMRSVSGLPNSTIYVVEPGFLGFSIH
PGGRWSLEVGQVYVLTVEVFDKSSTRVYISDNLKITFQFSKEYFEEQLSTSNGSYHVVKV
LKDGVVVINATLTSSLQERNSSQPKTYQISHQQEVKIYFPIQLKPSFLAFPHHPLGTSNR
FTVQVEGGSGNFTWSSSNETVAMVTTKGVVTAGQVRGNSTILARDVQNPFRSGDLKVYVM
KLNKMELLPFQADVEIGQIIEVPIAMYHVNTETKEAITFTDCSHLPLDLNADKQGVFTLF
KEGIQKPGATRCSSVHIAATSPGHTLVTVSVTGHEEHAWSSATFAAYEPLKALNPVEVAL
VTWQSVKEMVFEGGPHPWVLEPSRFFLELSMEKAEAIRVTEVRLPAKRKQNQYVYRVLCL
ELGEQVLTLRIGNHPGVLNPSPSVEKVQVRFICAHPANMLVTPMYKVPAGTQPCPLPQYN
KQLIPVSSLRDSVLELAVFDEHGRKFDNFSSLMLEWKSSNETLAYFEDSKSAEMVARDDG
SGQTRLHGHQILKVHQIKGTVLIGVNFAGYSGKKSPKGISNSPRSAGVELLLVEDVTVQP
ENATIYNHPDVKEMFNLVEGSGYFLINSSEQEVVAITYLEAESSVQLVPAHPGFLTLKVY
DLCLAYLGPAVAQVRVSDIQEVELDLIDKVEIGKTVLVVVRVLGSFKHPFRNKYFRNMDV
RLQLASAIVTLRLMEDQDEYSENYMLRAVTVGQTTLVAIATDRMGRKFTSAPRHIEVFPP
FRLVPEKMTLIATNMMQIMSEGGPQPQSIIHFSISNQTVAVVNRRGQVTGKSVGTAVLHG
TIQTVNEDTGKVIVFSQDEVQIEVVQLQAVRILAAATRLVTATEMPVYVMGVTSSQTPFS
FSTASPSLTFHWSMSKRDVLDLVPRHSEVFLQLPAENNFAMVVHTKAAGRTTIKVTVRSK
NSSFEQFEGNLLELSDEIQILVFEKLQLFYADCQPERILMPMNSQLKLHTNREGAAFVSS
RVLKCFPNSSVIEEDGGGLLRSGSIAGTAVLEVTSIEPFGVNQTTITGVQVAPVTYLRLS
SYPKLYTAQGRTLSAFPLGMSLTFIVEFYNNIGEKFHTHNTRLYMALNRDDLLLIGPGNR
NYTYMAQAVNKGVTVVGLWDQRHPGMADYIPVAVEHAIEPDTKLIFVGDVICFSTQLVNQ
HGEPGVWMISTNNIVQTDTVTGVGVARSPGTATIFYDIPGVVKTFREVVVNASSRLTLSY
DLKTYLTNTPNATVFKLFISTGRNVNLKGSCTPSQALAVEKVLLPESLMLCHVQFSNTLL
DIPASKVFHIHSEFSVEKGVYVCLIEVRQESEELRQVLSVADTSVYGWATLVSERGKNGM
QRIHIPFIPGFYMNQSEFVLGHKDTGELRILGVERVLESLEVFHSSPFLVVSGHKHSILT
TGLSIYLIRIVNFTAFQQMSAPAFINVSCALTNQQEAVIVRAKDASGADHCEDSGIFKNF
VGSYQILLFTLFAVLASTSFIFLAYNAFLNKVQTIPVVYVPTIGTTQPGSYTATCSPPHF
LSSQPPPVQSRLQHWLWSIRH
NT seq
5646 nt
NT seq
+upstream
nt +downstream
nt
atgattgcctttggggctcctcgaccccgaagcttcgggctccttttctccttgactcca
caccacttcttcctgtttttaattgggaccctggccaacaaactcaatgtgcctcaagtg
ttactacctttcagccgggagccaggccgggtgcccttcttgctggaggctcagcggggc
tgctacatctggcattccactcatcacgatgcagttaccattcagcctttatatgaaaat
ggcacttcatgttcccaaagggctgttcttgttgctgaatccacccaaccgatacgcctc
agcagcatcattcttgctcgagaagtggtgacggaccatgagctacgctgtgatgttaag
gtcgatgtgatagacaacattgaaattgtatctcgaacccgggagctgtatgtggacgat
gcaccgctggagcttatggtgagggccctggattctaaaggaaacactttcagtactctg
gcaggcatggtgtttgagtggagtattgcccaggacaatgagtcatcgagagaagagctg
tctagcaaaattaggattctgaaatactcggaagccgagtattctccgcctgactatatc
atcgagatggaaaaagaggagagacaaggagacgtgattttggtatctgggatgagaact
ggggctgctgttgtaaaagtccgaatttatgagccattctacaagaaagtggctgcagcc
ttgatccgcctgcttgttctggagaacatatttcttataccatcccatgacacatatctc
ttagtgggagcctatattaaatacagagtggcaaaaatggttcagggaagaatgacagag
gtaaaatttcccttggaacattacacattggaattgcaagaccacagatttaccaatgat
ggacttccttctagaacagtggctctgttggatgagaaaacagccacagtgactgctgtc
caactgggccaaactaaccttgtctttgtccacaaaaatgttcatatgcgctctgtgtct
ggactcccaaactctaccatatatgttgtagagcctggatttttaggcttcagtatccat
cctggaggccggtggagcctagaggtgggacaggtgtacgtcctcacagtggaagtgttc
gacaagagcagcacaagggtctacatttctgacaatctcaagatcacattccagttttcc
aaggagtactttgaagagcagctgagtacttcaaacggatcttaccatgtggtaaaagtc
ctgaaagacggagttgtggtgatcaatgcaaccctgacctctagccttcaggagagaaac
agttcccagccaaagacctatcaaatcagtcaccaacaagaggtgaagatttactttccc
attcagcttaaacccagctttctggcctttccccatcatcccctgggaacatcaaatcgg
ttcacagttcaggtagagggcggtagtggcaacttcacctggagctcttctaatgaaacc
gttgccatggttaccaccaaaggtgtggtaaccgcaggtcaggtgagagggaacagcacc
attttggcacgagacgtacaaaatccttttcgatctggagatcttaaggtgtatgtcatg
aagctgaacaaaatggaactgttaccatttcaagctgatgtggaaattggccagattatt
gaggtacccattgcaatgtatcatgtaaatacagagaccaaggaggccatcacattcaca
gactgttcacacttaccccttgatctcaacgcggataagcaaggagtcttcactcttttt
aaagaaggtattcagaagcctggagcgacacgctgttctagtgtccacatagcagccacg
tctccgggccacactctggtgaccgtcagtgtgactgggcatgaagagcacgcatggagc
agtgccacatttgctgcttacgaacctctaaaggctctaaaccctgtggaagtggctttg
gtgacatggcagtccgtgaaggaaatggtatttgaagggggccctcatccttgggtcttg
gagccatcccgattttttttggagctgagcatggagaaggcagaggccatcagagtaaca
gaagtccggttgccagctaagaggaagcagaaccagtatgtctaccgcgtgctgtgcctg
gagttaggggaacaagttctcactttacggattgggaatcaccccggagtcctaaaccct
agtccctctgtggaaaaggtgcaggtgcgcttcatctgtgcccatcctgccaatatgctg
gtgacaccaatgtacaaggtgccagctggcacccagccatgtcctttgccacagtacaac
aagcaactgattcctgtgtccagcttgagggactcagtcctagaactggcagtatttgat
gaacacgggaggaagtttgataatttcagctcactgatgctagaatggaaatcttccaac
gagacgctagcctattttgaggattctaagtcagcggagatggtagccagggacgatggc
agtgggcagacccggctgcacggccatcagatccttaaggtgcatcagataaaggggact
gtgctcattggagtcaattttgctggctattcagggaagaaaagcccaaaagggatttcc
aactcaccgagatctgcgggtgtagaactgctcctggtggaagacgtcacggtccagcct
gagaacgccaccatctacaaccaccctgatgtgaaggagatgtttaaccttgtggaagga
tctggctactttctgatcaacagcagtgagcaagaggtcgtcgccatcacttacctggag
gcggagagctcggtccagttagttccagcacatcctggatttctaaccctgaaagtgtat
gacctgtgcctggcctacttgggtccagcagtggcccaggtcagggtgtcagacatacag
gaggtcgagctggatctgattgataaggttgagatcggtaaaaccgtgttagtggtggtc
agggttcttggctctttcaaacaccctttccggaacaagtacttcagaaacatggatgtc
aggctgcagctggcatctgccatcgtcaccctgaggttaatggaagatcaggatgagtac
tctgaaaactacatgctccgtgctgtcactgtcggacaaaccacacttgtagccattgcc
acagacagaatggggaggaaattcacatcagcgcctcggcatatcgaggtcttccctcca
ttcagactcgttcctgagaaaatgaccctgattgcaactaacatgatgcagataatgtct
gaaggtggccctcagccccagtccatcattcacttctctatcagcaatcagactgtagct
gttgttaacaggaggggtcaagttacagggaaatcggtcggcacagctgtgctccacggc
accatccagacagtgaatgaagacactggcaaagtcattgtgttttcccaggatgaagtc
caaatcgaggttgtccagctccaggctgttaggatccttgcagctgcaacccgactcgtc
acggccactgagatgccagtgtacgtcatgggagtgacaagtagccagactcctttctcc
ttcagcactgcgagcccttcgctcacattccactggtccatgagcaagagggatgtgctg
gatctggtacccaggcattcagaggtatttctacaacttccagctgagaacaactttgcc
atggttgtccacacaaaagcagctggcaggactacgatcaaggtcacggtccgcagtaag
aacagctcctttgagcagtttgaggggaatctgctggagctgtccgatgagattcagatc
ctggtatttgaaaaacttcaacttttctatgcagactgtcaacctgagcggattctgatg
cctatgaattctcagctcaagctgcacaccaacagagaaggcgcagcctttgtgagttcc
cgtgttctcaagtgtttccctaactcctctgtcattgaagaagatggtggagggctcctg
aggtctggatccattgcgggtactgcagtattggaagtcacttctatagaaccttttgga
gtcaatcaaacaaccataactggagttcaggtagcaccagtgacttaccttcgattgagc
agctaccccaagctatacacagcacaaggaaggaccctgtcagcctttcctttgggcatg
tctctcacctttattgttgagttttataataacatcggagaaaaattccacacccacaat
actcggctttatatggctctgaacagagatgacttgctgcttattggaccaggaaataga
aactatacatatatggcccaggctgtgaataaaggggtgacagttgtgggactctgggac
caaagacatcctggcatggcagattacatccctgttgctgtagaacacgccattgagcca
gacaccaagcttatctttgttggagatgtcatctgcttcagcactcagcttgtcaatcag
catggtgagcctggggtgtggatgatttctaccaacaatattgtacagacagacacggtc
actggagtaggagtggctaggagcccaggaactgcaacaattttttatgacatccctgga
gttgtgaaaacatttcgagaggtagtagtcaatgcatcatcaagattgacactcagctat
gacctgaaaacttacctcaccaatacccccaatgcaactgtattcaaactcttcatcagc
acaggcagaaacgtcaacctcaaaggatcctgtaccccaagtcaggctttagctgttgaa
aaagttcttcttcctgagtccctcatgctatgccatgtgcagttcagcaatactttacta
gacattccagcaagtaaggtctttcacatccattcagaattcagtgtggagaaaggggtc
tatgtctgcctaatcgaggttcgacaggagtcagaggagctgcgccaagtgctcagtgtg
gcagacacctcggtctacgggtgggcaactctggtcagtgaacgtggcaagaatggcatg
caaagaatccacattcctttcattcctggcttttatatgaaccagtcagagttcgttctt
ggccacaaagacactggggagctaagaatcctgggagtggaaagagttctcgagagccta
gaggtcttccacagctccccctttctagtagtgtctggccataagcactctatcctcaca
acaggcctaagcatctacttaataagaatagtcaacttcactgccttccagcagatgtca
gcacctgctttcattaatgtttcctgtgcactgaccaatcaacaagaagctgtgatagtc
agagcaaaagatgcatctggtgcagatcactgtgaagactcgggtatcttcaagaacttt
gttggttcttaccagatcctcctgtttaccctctttgctgtgctggcatcaacttctttc
atctttctagcatacaatgccttcctgaacaaggtacagactattccagttgtttatgtg
ccaacaataggaacaactcagccaggttcttacacagccacatgttccccccctcacttc
ctgagctcacagccaccaccagtgcagagtcggctacaacactggttatggagtataaga
cactaa
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