Mus pahari (shrew mouse): 110322108
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Entry
110322108 CDS
T05929
Symbol
Pkp1
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mpah04812
]
110322108 (Pkp1)
Cytoskeleton proteins [BR:
mpah04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
110322108 (Pkp1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
HEAT_EZ
HEAT
V-ATPase_H_C
Med16_bridge
Motif
Other DBs
NCBI-GeneID:
110322108
NCBI-ProteinID:
XP_021054289
Ensembl:
MGP_PahariEiJ_G0027882
LinkDB
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Position
5:complement(110144660..110188847)
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AA seq
728 aa
AA seq
DB search
MNHSPLKTALAYECFQDQDNSTLALPSDQKMKTGTSGRQRVQEQVLMTVKRQKSKSSQSS
TLSHSNRGSMYDGLTDNYNNYGTTSRSSYFSKFQAGNGSWGYPIYNGTLKREPDNRRFSS
YSQMENWSRHYPRGSCATTGAGSDICFMQKIKASRSEPDLYCDPRGTLRKGTLGSKGHKT
TQNRCSFYSTCSGQKAVKKCPMRPPSCTSKQDPVYVPPISCNKDLSFGHSRASSKICSED
IECSGLTIPKAVQYLCSQDEKYQAIGAYYIQHTCFQDEAAKQQVYQLGGICKLVDLLRSP
NQNVQQAAAGALRNLVFRSTPNKLETRRQNGIREAVGLLRRSGSTEIQKQLTGLLWNLSS
TDELKEELVADALPVLTDRVIIPFSGWCDGNSNMSREVVDPEVFFNATGCLRNLSSADAG
RQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCILHNLSYRLDAEVPTRYRQLEYN
TRNAYTEKSSTGCFSNRGDKMMNNNYDCPLPEEETNPKGSSWLYHSDAIRTYLNLMGKSK
KDATLEACAGALQNLTASKGLMSNGMSQLIGIKEKGLPQIARLLQSGNSDVVRSGASLLS
NMSRHPVLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMTSQPQMAKQYF
SNSMLNNVFNLCRNTASSPKAAEAARLLLSDMWASKELQSVLRQQGFDRNMMGNIAGANN
LRNFTSRF
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgaaccactctccgctcaagaccgcgctggcgtacgaatgcttccaggaccaggacaac
tccacgctcgctttgccctctgaccaaaagatgaagaccggcacgtccggtaggcagcgc
gtgcaggagcaggtgttgatgaccgtcaaacggcagaagtccaagtcttcgcagtcgtcc
accttgagtcactccaaccgaggttccatgtatgatgggctgactgacaattacaacaac
tacggcaccacgagcagaagcagctacttctccaagttccaggcagggaatggctcgtgg
ggatatccgatctacaatgggaccctcaagcgggagcctgacaacagacgcttcagctcc
tatagccagatggagaactggagccggcactatccccgaggcagctgtgccaccacgggc
gccggcagcgacatctgcttcatgcagaaaatcaaggcgagccgcagtgagcctgacctc
tactgtgacccaaggggcacgctgcgcaagggcaccctgggcagcaagggccacaagacc
acccagaaccgatgcagcttctacagcacttgcagcggtcagaaggccgtcaagaagtgc
cccatgcggccaccctcctgcacctccaagcaagacccggtgtacgtgccacctatctcc
tgcaacaaggacctgtccttcggccactccagggccagctccaagatctgcagtgaggac
attgagtgtagtgggctgaccatccccaaggctgtgcagtacctgtgctcccaggatgag
aagtaccaggccatcggggcctattacatccagcacacctgcttccaggatgaagctgcc
aagcaacaggtctatcagctggggggcatctgcaagctggtggacctcctccgcagcccc
aatcagaatgtccagcaggctgctgccggggccctgcgcaacctggtattcaggagcacc
cccaataagctggagaccaggaggcagaacggaatccgtgaggctgtcggcctcctgagg
agaagtgggagcacggagatccagaaacagttgactgggctactctggaacctatcttcc
actgatgagctgaaggaggagctggtggccgatgccctgcctgttctgactgaccgggtc
atcattcctttctctggctggtgtgatggtaacagcaacatgtcccgggaagtagtggac
cccgaggtcttcttcaatgccaccggctgcttgaggaacctgagttcagctgatgctggc
cgccagactatgcggaactactctgggctcattgactccctcatggcctatgtccagaac
tgcgtggctgccagccgctgcgatgacaagtcggtggagaactgcatgtgtatcctgcat
aacctctcataccgcctggacgccgaggtgcccacccgctaccgccagctggagtacaac
acccgcaatgcctacaccgagaagtcctccactggctgcttcagcaacaggggtgacaag
atgatgaacaataactatgactgcccacttcctgaggaagaaaccaaccccaagggcagc
agctggctgtaccactcagatgccatccgcacctacctgaacctcatgggcaagagcaag
aaagatgctaccttggaggcctgtgctggggccctgcagaacctgacagccagcaagggg
ctgatgtccaatggtatgagtcagttgattggaataaaggaaaagggcctgccacaaatc
gcccgtctcctgcaatccggcaattcagacgtggtgcggtccggagcctctctgctgagc
aacatgtctcgccaccctgtgctgcacagagtgatgggaaaccaggtgttcccagaggta
accaggctcctcacgagccacaccggcaacaccagcaactctgaagacatcttgtcctcg
gcctgctacactgtgaggaatctgatgacctcacagcctcagatggccaagcagtacttc
tccaacagcatgctcaacaatgtcttcaacctgtgccgcaacactgcctcctcacctaag
gctgcagaggctgcccggctactcctgtctgacatgtgggccagcaaggagctgcagagt
gtcctcaggcagcaaggtttcgataggaacatgatgggaaacatagctggggccaacaac
ctcagaaacttcacctcccggttctaa
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