Mus pahari (shrew mouse): 110324703
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Entry
110324703 CDS
T05929
Symbol
Abcd4
Name
(RefSeq) ATP-binding cassette sub-family D member 4
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah02010
ABC transporters
mpah04146
Peroxisome
mpah04977
Vitamin digestion and absorption
mpah04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110324703 (Abcd4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
110324703 (Abcd4)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
110324703 (Abcd4)
04980 Cobalamin transport and metabolism
110324703 (Abcd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpah04131
]
110324703 (Abcd4)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mpah02000
]
110324703 (Abcd4)
Enzymes [BR:
mpah01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
110324703 (Abcd4)
Membrane trafficking [BR:
mpah04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
110324703 (Abcd4)
Transporters [BR:
mpah02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
110324703 (Abcd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_30
AAA_16
AAA_22
DEAD
DLIC
Sigma54_activat
IRK
AAA_7
AAA_29
nSTAND3
AAA_23
AAA_19
ATPase
T2SSE
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
110324703
NCBI-ProteinID:
XP_021058030
Ensembl:
MGP_PahariEiJ_G0029706
LinkDB
All DBs
Position
7:complement(79767275..79782593)
Genome browser
AA seq
606 aa
AA seq
DB search
MAVPGPTARAGARPRLDLQLVQRFVRIQKVFFPSWSSQNVLMFMTLLCVTLLEQLVIYQV
GLIPSQYYGVLGNKDLDGFKALTFLAVTLIVLNSTLKSFDQFTCNLLYVSWRKDLTEHLH
HLYFRARVYYTLNVLRDDIDNPDQRISQDVERFCRQLSSVTSKLIVSPFTLTYYTYQCFQ
STGWLGPVSIFGYFILGTMVNKTLMGPIVTKLVQQEKLEGDFRFKHMQIRVNAEPAAFYR
AGLVEHMRTDRRLQELLQTQRELMSRELWLYIGINTFDYLGSILSYVVIAIPIFSGVYGD
LSPTELSTLVSKNAFVCIYLISCFTQLIDLSTTLSDVAGYTHRIGELQEALLDMSRKSQD
CEALGESEWDLDKAPGCPTTEPSDTAFLLDRVSILAPSSDKPLVKDLSLKICEGQSVLIT
GNTGTGKTSLLRVLGGLWESVKGSVQMLADFGPHGVLFLPQKPFFTDGTLREQVIYPLKE
IYPDSGSADDERILRFLELAGLSSLVARTGGLDQQVDWNWYDVLSPGEMQRLSFARLFYL
QPKYAVLDEATSALTEEAESELYRIGQQLGMTFISVGHRPSLEKFHSWVLRLHGGGSWEL
TRIKLE
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcccgggacccacagcccgagctggtgctaggcccagattagatctgcaactt
gtccagaggttcgtgaggatacagaaggttttctttccttcttggtcatcgcagaatgtc
ttaatgttcatgacgctcttgtgcgtgaccctcctggagcaactggtgatctaccaagtt
ggcttgatccccagtcagtattatggagtcttgggaaacaaagacctggatggatttaag
gcactgaccttcctggctgtgacacttattgtcctcaactccaccctgaagagctttgac
cagttcacctgcaacctgctgtacgtgagctggaggaaggacctcaccgagcatctgcac
cacctgtacttccgggcccgcgtgtactacaccctcaacgtgctgcgggacgacattgat
aatccggaccagcgtatcagccaggatgtggagcgattctgccgccagctcagcagcgtg
accagcaagctgatcgtctcccccttcactcttacctactacacttaccagtgcttccaa
agcacaggctggcttgggcctgtgagcatctttggatatttcatcctggggaccatggtg
aacaaaactttgatggggcccatcgtgacgaaactggtgcagcaggagaaactggagggg
gattttaggttcaagcacatgcagattcgagtgaatgcggagcctgcggctttctataga
gctgggcttgtcgagcacatgaggacagaccgaaggctgcaggaactccttcagacccag
agagagctgatgtccagggagctctggctgtacattggtatcaacaccttcgactatctg
ggcagcatcctgagttacgtcgtcattgcaatccccattttcagtggggtctatggagac
ttgagtcccacagagcttagcaccctggtcagcaagaatgcctttgtgtgcatctacctc
atcagctgcttcacccagctcattgacctgtccaccacactctcggatgttgccggttac
acgcacaggattggagagcttcaggaggccctgctggacatgtcccgaaaatcacaagac
tgtgaagccctaggcgagagtgagtgggatttggacaaagccccagggtgtccgacaaca
gagccatcagacacagcttttctgctcgatcgggtttccatcttggccccctcttctgac
aagcccctggtcaaagacttgagtttgaagatctgtgaggggcagagtgtgctcatcaca
ggcaacacgggcactggcaagacctccctgctgcgggtgctgggaggcctgtgggagagc
gtgaaaggctcagtgcaaatgctggctgattttgggccccacggggtgctgttcctgcct
cagaagccgttcttcactgatgggacacttcgggagcaggtgatatatcccctgaaggag
atctaccctgattcaggttctgcagacgatgagaggatcttgaggttcttggagttggca
ggcctgtccagcttggtggcaaggactggaggtctggaccagcaggtggattggaactgg
tatgatgtcctgtccccaggggagatgcaaagactctccttcgcccgtctcttctacctg
cagcccaagtatgcagtgctcgatgaagccaccagtgccctgacagaggaagcggagagt
gagctctaccgaattggtcagcaactggggatgacatttatcagcgtgggacatcgtccc
agccttgaaaagtttcactcctgggttctgagactccacggaggaggaagctgggaactg
actagaatcaaactggaatga
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