Mus pahari (shrew mouse): 110324811
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Entry
110324811 CDS
T05929
Symbol
Otof
Name
(RefSeq) otoferlin isoform X1
KO
K19949
otoferlin
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpah04131
]
110324811 (Otof)
Membrane trafficking [BR:
mpah04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
110324811 (Otof)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
110324811
NCBI-ProteinID:
XP_021058167
Ensembl:
MGP_PahariEiJ_G0029324
LinkDB
All DBs
Position
7:2190988..2286577
Genome browser
AA seq
1997 aa
AA seq
DB search
MALIVHLKTVSELRGRGDRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNE
VLEIQIFNYSKVFSNKLIGTFRMVLQKVVEENRVEVTDTLMDDNNAIIKTSLSMEVRYHA
TDGTVGPWDDGEFLGDESLQEEKDSQETDGLLPGSRPSTRTPGEKSFRRAGRSVFSAMKL
GKTRSHKEEPQRQDEPAVLEMEDLDHLAIQLGDGLDPDSVSLASVTALTSNVSNKRSKPD
IKMEPSAGRPMDYQVSITVIEARQLVGLNMDPVVCVEVGDDKKYTSMKESTNCPYYNEYF
VFDFHVSPDVMFDKIIKISVIHSKNLLRSGTLVGSFKMDVGTVYSQPEHQFHHKWAILSD
PDDISAGLKGYVKCDVAVVGKGDNIKTPHKANETDEDDIEGNLLLPEGVPPERQWARFYV
KIYRAEGLPRMNTSLMANVKKAFIGENKDLVDPYVQVFFAGQKGKTSVQKSSYEPLWNEQ
VVFTDLFPPLCKRMKVQIRDSDKVNDVAIGTHFIDLRKISNDGDKGFLPTLGPAWVNMYG
STRNYTLLDEHQDLNEGLGEGVSFRARLMLGLAVEILDTSNPELTSSTEVQVEQATPVSE
SCTGRMEEFFLFGAFLEASMIDRKNGDKPITFEVTIGNYGNEVDGMSRPPRPRPRKEPGD
EEEVDLIQNSSDDEGDEAGDLASVSSTPPMRPQITDRNYFHLPYLERKPCIYIKSWWPDQ
RRRLYNANIMDHIADKLEEGLNDVQEMIKTEKSYPERRLRGVLEELSCGCHRFLSLSDKD
QSHSSRTRLDRERLKSCMRELESMGQQAKSLRAQVKRHTVRDKLRSCQNFLQKLRFLADE
PQHSIPDVFIWMMSNNKRIAYARVPSKDLLFSIVEEELGKDCAKVKTLFLKLPGKRGFGS
AGWTVQAKLELYLWLGLSKQRKDFLCGLPCGFEEVKAAQGLGLHSFPPISLVYTKKQAFQ
LRAHMYQARSLFAADSSGLSDPFARVFFINQSQCTEVLNETLCPTWDQMLVFDNLELYGE
AHELRDDPPIIVIEIYDQDSMGKADFMGRTFAKPLVKMADEAYCPPRFPPQLEYYQIYRG
SATAGDLLAAFELLQIGPSGKADLPPINGPVDMDRGPIMPVPVGIRPVLSKYRVEVLFWG
LRDLKRVNLAQVDRPRVDIECAGKGVQSSLIHNYKKNPNFNTLVKWFEVDLPENELLHPP
LNIRVVDCRAFGRYTLVGSHAVSSLRRFIYRPPDRSAPNWNTTVRLLRGCHRLRNGGPSS
RPTGEVVVSMEPEEPVKKLETMVKLDATSDAVVKVDVAEDEKERKKKKKKGPSEEPEEEE
PDESMLDWWSKYFASIDTMKEQLRQHETSGTDLEEKEEMESAEGLKGPMKSKEKSRAAKE
EKKKKNQSPGPGQGSEAPEKKKAKIDELKVYPKELESEFDSFEDWLHTFNLLRGKTGDDE
DGSTEEERIVGRFKGSLCVYKVPLPEDVSREAGYDPTYGMFQGIPSNDPINVLVRIYVVR
ATDLHPADINGKADPYIAIKLGKTDIRDKENYISKQLNPVFGKSFDIEASFPMESMLTVA
VYDWDLVGTDDLIGETKIDLENRFYSKHRATCGIAQTYSIHGYNIWRDPMKPSQILTRLC
KEGKVDGPHFGPHGRVRVANRVFTGPSEIEDENGQRKPTDEHVALSALRHWEDIPRVGCR
LVPEHVETRPLLNPDKPGIEQGRLELWVDMFPMDMPAPGTPLDISPRKPKKYELRVIVWN
TDEVVLEDDDFFTGEKSSDIFVRGWLKGQQEDKQDTDVHYHSLTGEGNFNWRYLFPFDYL
AAEEKIVMSKKESMFSWDETEYKIPARLTLQIWDADHFSADDFLGAIELDLNRFPRGAKT
AKQCTMEMATGEVDVPLVSIFKQKRVKGWWPLLARNENDEFELTGKVEAELHLLTAEEAE
KNPVGLARNEPDPLEKPKRPDTSFIWFLNPLKSARYVLWHTYRWLLLKLLLLLLLLALFA
LFLYSLPGYLAKKLLGA
NT seq
5994 nt
NT seq
+upstream
nt +downstream
nt
atggccctgatcgtccacctcaagactgtctcagagctccgaggcagaggtgaccggatc
gccaaagtcactttccgagggcagtccttctactcccgggtcctggagaactgcgaggat
gtggctgacttcgatgagacgttccggtggccagtggccagcagcatcgacaggaatgaa
gtgttggagattcagattttcaactacagcaaagtcttcagcaacaagctgatcgggacc
ttccgcatggtgctgcagaaggtggtggaggagaatcgggtagaggtgactgacacgctg
atggacgacaacaatgctatcatcaagaccagcctgagcatggaggtccggtatcacgcc
acagatggcactgtgggcccctgggatgatggagagttcctgggagacgaatccctccag
gaggagaaggacagccaggagacagatgggctgctacctggctcccgacccagcacccgg
acacccggcgagaagagctttcgcagagcgggaaggagtgtgttctcggccatgaaactc
ggcaaaactcggtcccacaaagaggagccccaaagacaagatgagccagcagtgctggag
atggaggacctggaccacctagccattcagctgggggatgggctggaccctgactccgtg
tctctagcctcagtcaccgctctcaccagcaatgtctccaacaaacggtctaagccagac
attaagatggagcccagtgctgggaggcccatggactaccaggtcagcatcacagtgatt
gaggctcggcagctggtgggcttgaacatggaccctgtggtgtgtgtggaggtaggcgat
gacaagaaatacacgtcaatgaaggagtccacaaactgcccttactacaacgagtacttt
gtcttcgacttccacgtctctcctgatgtcatgtttgacaagatcatcaagatctcggtt
atccattctaagaacctgcttcggagcggtaccctggtgggctccttcaaaatggatgtg
gggaccgtgtattcccagcctgaacaccagttccatcacaaatgggccatcctgtcagac
cccgatgacatctctgctgggctgaagggttatgtaaagtgtgatgtcgctgtcgtgggc
aagggagacaacatcaagacaccccacaaggccaacgagacggatgaggacgacattgaa
gggaacttgctgctgcccgagggcgtgccccctgaacgacagtgggcacggttctatgtg
aaaatttaccgagcagaaggactgccccggatgaacacaagcctcatggccaacgtgaag
aaggcattcatcggtgagaacaaggacctcgtcgacccctatgtgcaagtcttctttgct
ggacaaaagggcaaaacgtcagtgcagaagagcagctatgagccgctatggaacgagcag
gttgtcttcacagacctgttccctccactctgtaaacgcatgaaggtgcagatccgagac
tccgacaaggtcaatgatgtggccatcggcacccacttcatcgacctgcgcaagatttcc
aacgatggagataaaggcttcctgcctaccctcgggccagcctgggtgaacatgtacggc
tccacgcgcaactacaccctgctggacgagcaccaggacctgaatgaaggcctgggggag
ggtgtgtccttccgggcccgcctcatgttgggactggctgtggagatcctggacacctcc
aacccagagctcaccagctccacggaggtgcaggtggagcaggccacgcctgtctcggag
agctgcacggggagaatggaagaatttttcctatttggagccttcttggaagcctcaatg
attgaccggaaaaacggggacaagccaataacctttgaggtgaccataggaaactatggc
aatgaagttgatggtatgtctcggcccccaaggcctcggccccgcaaagagcctggggat
gaagaagaggtagacctgattcagaactccagtgacgatgaaggtgacgaagccggggac
ctggcctcggtgtcctccaccccacctatgcggcctcagatcacagacaggaattatttc
cacctgccctacctggagcgcaagccctgcatctatatcaagagctggtggcctgaccag
agacggcgcctctacaatgccaacatcatggaccacattgctgacaagctggaagaaggt
ctgaatgatgtgcaagagatgatcaaaacggagaagtcctacccggagcgccgcctgcgg
ggtgtgctagaggaactcagctgtggctgccatcgcttcctctccctctcggacaaggac
cagagccactcgtcccgcaccaggctggatcgggagcgcctcaagtcctgtatgagggag
ctggagagcatggggcaacaggccaagagcctgagggctcaggtgaagcggcacactgta
cgggacaagctgagatcgtgccagaactttctgcagaagctacgcttcttggcagatgag
ccccagcacagcattcctgatgtgttcatttggatgatgagcaacaacaaacgcatcgcc
tatgcccgcgtgccttccaaagacctgctgttctccatcgtggaggaggaactgggcaag
gactgcgccaaagtcaagaccctcttcctgaagctgccagggaagaggggcttcggctcg
gcgggctggacggtacaggccaagctggagctctacctgtggctgggcctcagcaagcag
cgaaaggacttcctgtgtggcctgccctgtggcttcgaggaggtcaaggcagcccaaggc
ctgggcctgcattcctttccgcccatcagcctggtctacaccaagaagcaagccttccag
ctccgagcacacatgtatcaggcccgaagcctctttgccgctgacagcagtgggctctct
gatccctttgcccgcgtcttcttcattaaccagagccagtgcacggaggttctgaatgag
acactgtgccccacctgggaccagatgctggtatttgacaacctggagctgtacggtgaa
gctcacgagctacgagatgatccccccattattgtcattgaaatctatgaccaggacagc
atgggcaaagctgacttcatgggccggacctttgccaagcccctggtgaagatggcagac
gaggcatactgcccacctcgcttcccgccgcagcttgagtactaccagatctaccgaggc
agcgccacggccggagacctactggctgccttcgagctgctgcagattgggccatcaggg
aaggctgacctgccacccatcaacggcccagtggacatggacagagggcccatcatgcct
gtgcccgtgggaatccggccagtgctcagcaagtaccgagtggaggtgctgttctggggc
ctgagggacctaaagagggtgaacctggcccaggtggaccgaccacgggtggacatcgag
tgtgcaggaaagggggtacaatcctccctgatccacaattataagaagaaccccaacttc
aacaccctggtcaagtggtttgaagtggacctcccagagaatgagctcctgcatccaccc
ttgaacatccgagtggtagactgccgggcctttggacgatacaccctggtgggctcccac
gcagtcagctcgctgaggcgctttatctaccgacccccagaccgctcagcccccaactgg
aacaccacagtcaggctgctccggggctgccacaggctgcgcaatgggggcccctcttct
cgccccacaggggaggttgtagtaagcatggagcctgaggagccagtgaagaagctggag
accatggtgaagctggatgcgacttctgatgctgtggtcaaggtggatgtggccgaagat
gagaaggaaaggaagaagaagaaaaagaaaggcccgtcagaggagccagaggaagaggag
cctgatgagagcatgctggattggtggtccaagtacttcgcctccatcgacacaatgaag
gagcaacttcgacaacatgagacctctggaactgacttggaagagaaggaagaaatggaa
agcgctgagggcctgaagggaccaatgaagagcaaggagaagtccagagctgcaaaggag
gagaaaaagaagaaaaaccagagccctggccctggccagggatcagaggctcctgagaag
aagaaagccaagattgatgagcttaaggtgtaccccaaggagctggagtcagagtttgac
agctttgaggactggctgcataccttcaacctgttgaggggcaagacgggggatgatgag
gacggctccacagaggaggagcgcatagtaggccgattcaagggctccctctgtgtgtac
aaagtgccactcccagaggatgtatctcgagaagctggctatgaccccacctacggaatg
ttccagggcatcccgagcaatgaccccatcaatgtgctggtccgaatctatgtggtccgg
gccacagacctgcacccggccgacatcaatggcaaagccgacccctatattgccatcaag
ttaggcaagaccgacatccgagacaaggagaactacatctccaagcagctcaacccagtc
tttgggaagtcctttgacatcgaggcctccttccccatggagtccatgctgacagtagca
gtgtacgactgggatctggtgggcactgatgacctcattggagaaaccaagattgacctg
gaaaaccgcttctacagcaagcaccgtgccacctgcggcatcgcgcagacctattccata
catggctacaatatctggagggaccccatgaagcccagccagatcctgacacgcctctgc
aaagagggcaaagtggacggcccccactttggtccccatgggagagtgagggttgccaac
cgtgtcttcacggggccttcagagatagaggatgagaatggtcagaggaagcccacagat
gagcacgtggcactgtctgctctgagacactgggaggacatcccccgggtgggctgccgc
cttgtaccagaacacgtggagaccaggccactgcttaaccctgacaagccaggcattgag
cagggccgcctggagctgtgggtggacatgttccccatggacatgccggcccctgggaca
cctctggatatatcccccaggaaacccaagaagtacgagctgcgggtcatcgtgtggaac
acagacgaggtggtcctggaagatgacgatttcttcacaggagagaagtccagtgatata
tttgtgagggggtggctgaagggccagcaggaggacaaacaggacacagacgtccactat
cactccctcacaggggagggtaacttcaactggaggtacctcttccccttcgactacctg
gcggccgaagagaagatcgttatgtccaagaaggagtctatgttctcctgggatgagacg
gagtacaagatccctgcgaggctcaccctgcagatctgggacgctgaccacttctcggct
gacgacttcctgggggctatcgagctggacctgaaccggttcccgaggggcgctaagaca
gccaagcagtgcaccatggagatggccaccggggaggtggacgtgcccctggtttccatc
tttaaacagaaacgtgtcaaaggctggtggcccctcctggcccgcaatgagaatgatgag
tttgagctcacgggcaaagtggaggcggagctacacctactcactgcagaggaggcagag
aagaatcctgtgggcctggctcgcaatgaacctgaccccctagaaaaacccaagcggcct
gacacaagcttcatctggttcttgaaccctctcaagtctgcccgctacgtcctgtggcat
acctaccgctggctactcctcaaactcctgctactcctcctcctcctggcgctctttgcc
ctgtttctctactctctgcctggctacctggccaagaagctcctcggggcctga
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