Mus pahari (shrew mouse): 110326545
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Entry
110326545 CDS
T05929
Symbol
Tdg
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
110326545 (Tdg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpah03400
]
110326545 (Tdg)
Enzymes [BR:
mpah01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
110326545 (Tdg)
DNA repair and recombination proteins [BR:
mpah03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
110326545 (Tdg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
110326545
NCBI-ProteinID:
XP_021060725
Ensembl:
MGP_PahariEiJ_G0031422
LinkDB
All DBs
Position
9:complement(92363551..92381853)
Genome browser
AA seq
420 aa
AA seq
DB search
MDAEAARSYSLEQVQALYSFPFQQMMAEVPNMAVTTGQQTPAVAPSMATVTEQQMPAEAP
AQEPAPEAPKRRKRKPRAVEPQEPVEPKKPATSKKSGKSTKSKEKQEKITDAFKVKRKVD
RFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLS
EVQLNHMDDHTLPGKYGIGFTNMVERTTPGSKDLSSKEFREGGRILVQKLQKYQPRIAVF
NGKCIYEIFSKEVFGVKVKNLEFGLQPHKIPDTETLCYVMPSSSARCAQFPRAQDKVHYY
IKLKDLRDQLKGIERNSDIQEVQYTFDLQLAQEDAKKMAVKEEKYDPGYEAAYGGAYGEN
PCNGEPCGIASNGLTAHSAEPRGEAAPGDVPNGQWTAQSFTEQIPFDNCGTREQEEGSHA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggacgcagaggccgcgcgcagctattctctggagcaagttcaagctttgtattcattt
ccatttcaacaaatgatggcagaagttcctaacatggcagtcacgactggacagcagacg
ccagcagtagctcctagcatggcaaccgtgactgaacagcagatgcccgcagaagctcct
gcccaggaacctgcaccagaagctccaaagagaaggaaaaggaaacccagagcagtagag
ccccaggaaccagtggagcccaagaaacctgctacgtcaaagaaatccggcaagtccaca
aaatcaaaagaaaagcaagagaaaatcacagacgcatttaaagtgaaaaggaaagtggac
cgtttcaacggcgtctctgaagccgagcttctgaccaagactctgcctgacatcctgacc
ttcaatctggatattgtgattattggcattaacccgggattaatggctgcttacaaagga
catcactaccctgggcctggaaatcacttctggaagtgtctgttcatgtcggggctgagt
gaggtgcagctgaatcacatggatgaccacaccttacccgggaaatacggcattggattc
accaacatggtggaaaggacgacgccaggcagcaaggatctgtctagtaaagagttccgg
gaaggagggcgcatcctggtgcagaaactgcagaaataccagccacgaatagcagtgttt
aatggaaaatgtatttatgaaattttcagtaaagaagtttttggagtaaaggttaagaac
ttggaatttgggcttcaaccccacaagatcccagacacagaaactctttgctacgtcatg
ccatcgtccagtgccagatgtgctcagtttccccgggcccaggacaaagttcattactac
attaagctgaaggacttgagagaccagctgaaaggcattgaacgcaactcggacattcag
gaagtgcagtatacatttgacctgcagcttgcgcaagaggatgcaaagaagatggctgtt
aaggaagaaaagtatgatccaggctatgaggcagcatacggcggcgcctatggtgaaaac
ccatgcaatggtgaaccttgtggcattgcttcaaatgggctaacagcccacagtgcggag
ccaagaggagaagcagctcccggtgacgttccgaatgggcagtggacggcgcagtcgttt
acagaacagatcccttttgataactgtgggacccgagagcaggaagaggggagccacgcc
tag
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integrated database retrieval system
