Mus pahari (shrew mouse): 110326877
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Entry
110326877 CDS
T05929
Symbol
Apaf1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X1
KO
K02084
apoptotic protease-activating factor
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah01524
Platinum drug resistance
mpah04115
p53 signaling pathway
mpah04210
Apoptosis
mpah04215
Apoptosis - multiple species
mpah05010
Alzheimer disease
mpah05012
Parkinson disease
mpah05014
Amyotrophic lateral sclerosis
mpah05016
Huntington disease
mpah05020
Prion disease
mpah05022
Pathways of neurodegeneration - multiple diseases
mpah05134
Legionellosis
mpah05152
Tuberculosis
mpah05160
Hepatitis C
mpah05161
Hepatitis B
mpah05162
Measles
mpah05164
Influenza A
mpah05168
Herpes simplex virus 1 infection
mpah05169
Epstein-Barr virus infection
mpah05200
Pathways in cancer
mpah05222
Small cell lung cancer
mpah05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
110326877 (Apaf1)
04215 Apoptosis - multiple species
110326877 (Apaf1)
04115 p53 signaling pathway
110326877 (Apaf1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110326877 (Apaf1)
09162 Cancer: specific types
05222 Small cell lung cancer
110326877 (Apaf1)
09172 Infectious disease: viral
05161 Hepatitis B
110326877 (Apaf1)
05160 Hepatitis C
110326877 (Apaf1)
05164 Influenza A
110326877 (Apaf1)
05162 Measles
110326877 (Apaf1)
05168 Herpes simplex virus 1 infection
110326877 (Apaf1)
05169 Epstein-Barr virus infection
110326877 (Apaf1)
09171 Infectious disease: bacterial
05134 Legionellosis
110326877 (Apaf1)
05152 Tuberculosis
110326877 (Apaf1)
09164 Neurodegenerative disease
05010 Alzheimer disease
110326877 (Apaf1)
05012 Parkinson disease
110326877 (Apaf1)
05014 Amyotrophic lateral sclerosis
110326877 (Apaf1)
05016 Huntington disease
110326877 (Apaf1)
05020 Prion disease
110326877 (Apaf1)
05022 Pathways of neurodegeneration - multiple diseases
110326877 (Apaf1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
110326877 (Apaf1)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
110326877 (Apaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
NB-ARC
APAF1_C
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
EIF3I
APAF-1-like_WHD
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
CARD
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_SCAP
Beta-prop_NUP159_NUP214
WD40_like
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_NWD2_C
PEP5_VPS11_N
Beta-prop_WDR11_2nd
Beta-prop_DCAF4
Beta-prop_WDR75_2nd
Ge1_WD40
Beta-prop_SPT8
Beta-prop_Nup120_160
CARD_2
WDR54
Utp8_b_propeller
KNTC1_N
AAA_16
NPHP3_N
AAA_22
Beta-prop_IP5PC_F
ATPase_2
NACHT
Motif
Other DBs
NCBI-GeneID:
110326877
NCBI-ProteinID:
XP_021061162
Ensembl:
MGP_PahariEiJ_G0031362
LinkDB
All DBs
Position
9:83900047..83987310
Genome browser
AA seq
1249 aa
AA seq
DB search
MDAKARNCLLQHREALEKDIKTSYIMDHMISNGVLSVIEEEKVKSQATQYQRAAALIKMI
LNKDNCAYISFYNALLHEGYKDLAALLHSGLPLVSSSSGKDTDGGITSLVRTVLCEGGVP
QRPVIFVTRKKLVSAIQQKLWKLNGEPGWVTIYGMAGCGKSVLAAEAVRDHSLLEGCFSG
GVHWVSIGKQDKSGLLMKLQNLCTRLGQEESFSQRLPLNIEEAKDRLRVLMLRKHPRSLL
ILDDVWDPWVLKAFDNQCQILLTTRDKSVTDSVMGPKHVVPVESGLGREKGLEILSLFVN
MKKEDLPAEAHSIIKECKGSPLVVSLIGALLRDFPNRWAYYLRQLQNKQFKRIRKSSSYD
YEALDEAMSISVEMLREDIKDYYTDLSILQKDVKVPTKVLCVLWDLETEEVEDILQEFVN
KSLLFCNRNGKSFCYYLHDLQVDFLTEKNRSQLQDLHRKMVTQFQRYYQPHTLSPDQEDC
MYWYNFLAYHMASANMHKELCALMFSLDWIKAKTELVGPAHLIHEFVAYRHILDEKDCAV
CENFQEFLSLNGHLLGRQPFPNIVQLGLCEPETSEVYRQAKLQAKQEVDTGRLYLEWINK
KTIKNLSRLVVRPHTDAAYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEV
LCCAFSSDDSYIATCSVDKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGS
NDFFLKLWDLNQKESRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKS
INVKHFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHH
STIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTA
SDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLP
EAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGIGHKKAVRHIQFTSDGQTLIS
SSEDSVIQVWNWQTEDYVFLQAHQETVKDFRLLKDSRLLSWSFDGTVKVWNVITGRIERD
FTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSMDGI
LLATGDDNGEIRIWNVSDGQLLHLCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAGGYL
KWWNVATGESSQTFYTNGTNLKKIHVSPDFRTYVTVDNLGILYILQVLE
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaaaggcccgcaattgtttgcttcaacatagagaagctttggaaaaggacatc
aaaacatcctacatcatggatcacatgatcagtaatggcgtcttatcagtaatagaggag
gaaaaggtcaaaagtcaggccactcaatatcaacgagcagccgctttaattaaaatgata
cttaataaagacaactgtgcctatatttcattctacaatgctctgttacacgagggctat
aaggaccttgctgcgcttctgcacagtggccttcctcttgtgtcgtcttctagtggcaag
gacacagacggtggaataacttcattagtaaggacagtgctgtgtgaaggtggagtaccc
cagaggccagttatttttgttactagaaagaagctggtcagtgcgattcagcagaagctc
tggaaactgaatggagaaccagggtgggtcaccatatatgggatggcaggctgtggcaag
tctgtattagctgcggaagctgtccgagatcactctctcttagaaggttgcttttcaggg
ggcgtacactgggtttccatcggaaaacaagacaaatctgggcttctcatgaaactgcag
aatctgtgcacgcggttgggccaagaagagagtttctctcaaaggcttccacttaatatt
gaggaggccaaagaccgtctccgtgttctgatgctgcgcaaacacccaaggtctctgttg
atcttggatgatgtttgggatccttgggtgttaaaagcttttgacaatcagtgtcagatt
cttcttacaaccagagataagagtgttacagattcagtaatgggtcctaagcatgtggtc
cctgtggagagtggtctggggagagagaaaggacttgagatcttgtcactttttgttaac
atgaagaaagaagatctgccagcggaggctcacagtattataaaggaatgcaaaggttct
cctcttgtagtgtctttaattggtgcgcttttacgtgattttcccaatcgctgggcatac
tacctcagacagcttcagaataagcagtttaagagaataaggaagtcttcatcgtatgat
tatgaggctctggatgaagccatgtctataagtgttgaaatgctcagagaagacatcaaa
gactattacacggacctttccatcctgcagaaggacgtcaaggtacctactaaggtgttg
tgcgttctctgggacttggaaacggaagaagttgaagacatcctgcaggagttcgttaat
aagtctctcttattctgtaatcggaatggaaagtcattttgttattatttacatgatctt
caagtcgattttcttacagagaagaatcgcagtcagcttcaggatctgcacaggaagatg
gtcactcagtttcagaggtattaccagccacacacgctatctccagaccaggaggactgc
atgtattggtacaacttcctagcctatcacatggccagtgccaatatgcacaaagaactt
tgtgccttaatgttttctctggactggattaaagcaaaaacagaacttgtcggccctgcc
catctgattcatgaattcgtggcatataggcatatattggatgaaaaggattgtgcagtc
tgtgagaattttcaagagtttttatctttaaatggacacctccttggacgacagccattt
cccaatattgtacagctgggcctctgtgaaccagaaacttccgaagtttatcgacaagca
aagctgcaggccaagcaggaggtggatactgggcgcctttacctggaatggataaacaaa
aaaaccatcaagaatctgtcccgcttagtcgtccgcccccacaccgatgctgcttaccat
gcgtgtttttctcaggatggtcagagaatagcttcttgtggagctgataaaaccttacag
gtgttcaaagctgagacaggagagaaacttcttgatatcaaagctcacgaagatgaggtg
ctctgctgtgcgttctcctcagatgatagttacatagcgacctgctcagtggataagaag
gttaagatttgggattctgcaactgggaagctagtgcacacctacgacgagcactcggag
caagtcaattgctgccatttcaccaacaagagtaaccaccttctcttggccaccgggtca
aatgatttcttcctcaagctctgggacttgaatcaaaaagaatctcgaaataccatgttt
ggtcacacgaactcagtcaaccactgcaggttctcaccagacgatgaactcttggctagc
tgctcagctgacgggactttaaggctttgggatgtgagatcagcaaacgagaggaaaagc
attaatgtgaagcacttcttcctgagttcagaagacccgccagaggatgtggaggtgata
gtgaaatgttgttcctggtctgcagatggtgacaaaataatagtggcagcaaaaaacaaa
gtcctcctttttgatattcataccagtggcctattggcagagatccacacaggtcatcat
agcaccatccagtactgtgacttctccccctatgaccatttggccgtgattgccctgtct
cagtactgtgtggagttgtggaacattgactcccgcctaaaagtggctgactgcagagga
catttgagttgggttcatggtgtgatgttttctcctgatggctcgtcgtttttgacagct
tctgatgaccaaacaataagggtctgggagacaaaaaaggtatgcaagaactctgccatt
gtgctaaagcaggaaatagatgtcgtgtttcaagagaatgaaacgatggtccttgcagtt
gacaacataagaggcctgcaactcattgctgggaaaacaggccagattgattacctgcct
gaagcccaagtgagttgctgctgcctcagtccacaccttgagtacgtggcattcggagat
gaagatggagccattaagattatagaacttccaaacaacagagttttcagttctgggatt
gggcacaagaaagctgtccggcacatccagttcacctctgatgggcagacactgatttca
agttctgaagattctgtgattcaggtatggaattggcagacagaggactatgtatttttg
caagcccatcaggaaacagtaaaggacttcaggctcctcaaagattcaagattgctttct
tggtcatttgatggaacggtgaaggtgtggaatgtcattaccggaagaatagaaagagac
tttacttgtcaccagggcacagtgctttcctgtgctatctcttctgatgcgaccaagttt
tcatctacctctgctgataagactgccaagatctggagttttgacctcctttcccctctt
catgagctaaagggccataatggctgtgtccgctgctctgccttctcgatggatggcatc
ctgttggcaactggagatgacaatggagaaatcaggatatggaatgtgtcagatggccag
cttcttcatctgtgtgctcccatctcggtggaggaaggaactgctacccacggcggctgg
gtaacggatgtgtgcttctctcccgacagtaaaacgcttgtctctgctggaggatatctc
aagtggtggaatgttgccactggggaatcctcacagaccttctacacaaatggaacaaac
ctcaagaaaatccacgtgtcccctgacttcagaacctatgtgactgtcgataatcttggt
attttatatattttacaggttttagagtaa
DBGET
integrated database retrieval system
