Mus pahari (shrew mouse): 110327606
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Entry
110327606 CDS
T05929
Symbol
Fyco1
Name
(RefSeq) FYVE and coiled-coil domain-containing protein 1
KO
K21954
FYVE and coiled-coil domain-containing protein 1
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
110327606 (Fyco1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpah04131
]
110327606 (Fyco1)
Membrane trafficking [BR:
mpah04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
110327606 (Fyco1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
RUN
GOLD_2
Motif
Other DBs
NCBI-GeneID:
110327606
NCBI-ProteinID:
XP_021062342
Ensembl:
MGP_PahariEiJ_G0015731
LinkDB
All DBs
Position
10:complement(116534042..116595631)
Genome browser
AA seq
1454 aa
AA seq
DB search
MASSSTETQLQRIIRDLQDAVTELSNEFKEGGEPITDDSTSLHKFSYKLEYLLQFDQKEK
ASLLGSKKDYWDYFCACLAKVKGANDGIRFVRSISELRTSLGKGRAFIRYSLVHQRLADT
LQQCFMNTKVTSDWYYARSPFLKPKLSSDIVGQLYELTEVQFDLASRGYDLDAAWPTFAR
RTLATSPSAYMWKPPSRSSSMSSLVSNYLQTQEMASSLDLNSSLNNEALESFDEMRLELD
QLEVREKQLQEHVQQLDRENQELRMMISRQGGQLQVEKEMGYLAVEDSIGLVNLVAELHK
QGKVTQATVKKLQTCLQALELNVDKKEYSHSALQLENMAKELDAIRESLGRKNQLLASLS
ECLARAEKRENLPPNTKLHQEPVPTELALKFQELKGKLQALEGENTKAQELNRQQSIKLE
QMAKELRLKEEARASLEHLVKDMVPLQEELSGKKQESAQLRRQLQESLAHLSSVEEELTE
ARQQEKQHREEKQLLEQEAKSLTWQLQLLETQLGQVSQLVSDLEEQKKQLMQDRDHLSQK
VSTLEQLAEAHGTSKSKEAVASLSFVPPQSREMPEKGQQCLQEEQVNNTTVSEADQEELQ
KVNQELQKELQNMAVRNQLLEGKLQALQTDYKALQQREAAIQGSLASLEAEQASIRHLGN
QMEASLLAVRKAKETMKAQVAEKEAALQSKESECQRLQEEADQCRLQTEAQAQELKALEN
QCQQQIQLIEVLSAEKGQQGLSLPQVNSDQLALSQAQLEIHQGEAQRLQNEVVDLQAKLQ
VALGDRDKLQSQLGVAETVLREHKTLVQQLKEQNEALNRAHVQELLQCSEREGILQEESI
YKAQKQEQELQALKAELSQVRCSSEGAHLEHAELQDQLHRANTDTAELGIQVCALTAEKD
RMEGALASLAQELQDSKEAALQERKGLELQVMQLQQEKERLQEKVKAAEEAASSFSGLQA
QLAQAEQLAQSLQETAHQEQDALKFQLSAEIMDHQNRLKTANEECGSLRAQLEEQGQQLQ
MTKEAVQELEITKAAMEEKLNCTSSHLAECQASLLHKDEESTMLRTSLERTQKELEKATS
KIQEYYNKLCQEVTNRERNDQKMLADLDDLNRTKKYLEERLIELLRDKDALWQKSDALEF
QQKLSAEEKCLGDMEVNHCLDCKREFSWIVRRHHCRICGRIFCYYCCNNYVVTKSSGKKE
RCCRACFQKFGEGSESPDSSGSGTSQGVPSPAEAGPQSIGSQGTNPVCRPPDDAVFDIIT
DEELCQIQESGSSLPETPTETDSMDPNMAEQDTTSNSLTPEDTEDMPMGQDAEICLLKSG
ELMIKLPLTVEEITSFGEGNRELFVRSSTYSLITITVAEPGLTISWVFSSDPKSISFSVV
FQETEDTPLDQCKVLIPTTRCNSHKESIRGQLKVRIPGIYLLIFDNTFSRFISKKVFYHL
TVDRPVIYDGSDFP
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atggcttctagcagcactgagacccagctccagaggatcatccgtgatctacaagatgca
gttacagaactaagtaatgaatttaaggaaggcggagaaccaatcacagatgacagcacc
agcttgcacaagttttcttacaaacttgagtatcttctgcaatttgatcagaaggagaaa
gctagcctcctgggtagcaagaaagactactgggattacttctgtgcgtgcctagccaag
gtgaaaggagcaaatgatgggattcgatttgtcaggtccatctctgagctccgaacgtct
ctgggaaaagggagagccttcattcgctactctttggtacaccagaggttggcagacact
ttgcagcagtgtttcatgaacactaaagtaaccagtgactggtattatgcaagaagcccc
ttcctgaagccaaagctgagctctgacattgtgggtcaactatatgagctgactgaggtt
cagtttgatctagcatcaagaggctatgacttggatgccgcctggccaacatttgccagg
aggacgctagccaccagcccatctgcttacatgtggaaaccccccagccgaagctccagc
atgagtagtttagtgagcaactacttgcagactcaggagatggcctccagtcttgacctg
aatagttctctaaacaatgaagcactagaaagcttcgatgagatgcggctggagctggac
caattggaggttcgggagaaacagctacaagaacatgtacagcagctagacagggagaat
caagaacttcgaatgatgatcagcaggcaagggggacagcttcaggtagagaaggagatg
gggtaccttgcagtcgaggatagcattggccttgtgaacctggtagcagagctccacaag
caagggaaagtcacccaggccacagtgaagaagctacaaacttgtctgcaggccctggag
ctaaatgtagacaagaaagagtacagccactcagccttgcagcttgagaacatggcaaag
gagcttgatgctataagagagtccttgggtaggaagaaccagcttctggccagtctttca
gaatgcctcgctagggcagagaaaagggaaaatctgcctccaaacacaaagcttcatcaa
gagccagttcctactgaactggcgctgaagttccaggagctgaagggaaaacttcaagcc
ctagaaggagagaacaccaaggcccaggagctaaacaggcagcagagtatcaagctagag
caaatggccaaggaactacggctgaaggaggaggcccgggctagcctagaacatttagtg
aaggatatggtcccacttcaggaagagctgtctggaaagaagcaagagtcagctcagctc
cgacgacagcttcaggaatccctggcccacttgagctctgtggaggaggagctgactgaa
gccaggcagcaggaaaagcagcatcgagaagaaaagcagctactggagcaggaagccaag
tctctgacatggcagctgcagctcctagagacccaactaggacaggtgagtcagcttgta
agtgacctggaggagcagaagaagcagctcatgcaggacagagaccacctcagccagaaa
gtaagcacactagagcagctagctgaggcacatgggacaagtaagagtaaagaggctgtg
gcttccttgagctttgtcccaccacagtctagggagatgccagaaaaggggcagcagtgc
ctccaggaagaacaggtaaacaataccacagtgtcagaggcagaccaggaggagttgcaa
aaggtcaaccaggagctacagaaggagctgcagaacatggctgtccgcaaccagctccta
gaaggcaaactgcaggccttgcaaactgactataaggcactgcagcagcgagaggcagca
atccagggctctttagcctccctggaagctgagcaggctagcatccggcacctgggaaac
cagatggaagcaagcctcctggctgtgaggaaagccaaagagactatgaaagcccaggtg
gcagagaaggaggctgccctgcagagtaaggagagtgagtgccagaggctgcaggaagag
gcagatcagtgccggcttcagacagaggcccaggcccaggagctcaaagctcttgagaac
cagtgccagcagcagattcagctgattgaggtcctctctgcagaaaaaggccaacaggga
ctcagcctgccccaagtcaactctgaccaactggccctgtctcaagcacagctggaaatt
caccagggggaagcccagcggttacagaatgaggtggtggacctccaggccaagctccag
gtggccctaggtgatcgagacaagttacagagccagctgggtgtggctgagacagttcta
agggagcacaagaccctagtgcaacaactgaaagagcagaatgaagccctcaacagggcc
catgttcaggagctgcttcagtgctcagagagagaggggatactacaggaggagagcatc
tacaaggcccagaagcaggaacaagagctacaagccctgaaggcagagctgtcacaggtg
aggtgcagctctgaaggagcccacctggaacatgcagagctacaggaccagctgcaccga
gccaacacagacacagctgagcttggcatacaggtctgtgcactgacagctgagaaggat
cggatggagggggccctggccagcttagcccaggagctccaggactccaaagaagcagca
ctacaggaacgaaagggcttggagctccaagtgatgcaacttcagcaagagaaggagagg
ttgcaggaaaaggtgaaggcagctgaggaggcagccagttcattctctggtctgcaggca
cagctggcccaggctgagcagctggcccagagcctccaagagactgcacaccaggaacaa
gatgccctcaagttccaactaagtgctgagattatggaccaccagaacagattaaagaca
gccaatgaagagtgtgggagcctcagggcccagctagaagaacaaggccaacagctgcaa
atgactaaggaggctgtgcaggaactggagatcaccaaggcagccatggaggagaagctg
aattgcaccagtagccaccttgcagagtgccaggcctccttgttgcacaaagatgaagaa
agcactatgcttcgaaccagcctagaaagaacacagaaggaacttgaaaaggctacatca
aaaattcaagaatattacaacaaactctgccaagaggtgacaaacagggaaaggaatgac
cagaagatgcttgcagacctcgatgacctgaacagaaccaagaaataccttgaggagcgg
ctgatagagctgctgagggacaaagatgctctctggcaaaagtccgatgcactggaattc
cagcagaagctcagtgctgaagagaaatgtcttggggacatggaagtcaaccactgcctt
gactgcaagcgggagttcagctggatagtgcggcggcaccactgcaggatatgtggccgc
atcttctgttactactgctgtaataactatgttgtgactaagtccagtggcaagaaggaa
cgctgctgccgagcctgcttccagaagttcggtgaaggctctgaatcccctgacagcagt
ggttcaggcactagccagggagtgcctagcccagctgaagcaggtccccagtccatagga
agccaaggaacaaacccagtctgcagaccaccagatgatgcagtgtttgacatcatcact
gatgaagaactgtgccagatccaagaatctggctcatccttgcctgaaacacccaccgaa
actgattcaatggatccaaatatggctgaacaggacaccacatcaaactcattaacccct
gaagacaccgaagacatgcccatgggacaagatgctgaaatctgcttgctgaagtcagga
gagctgatgatcaaattacccctcacagtagaggagatcaccagctttggggagggcaac
agggagctgtttgtgaggtccagtacctacagcctgattaccatcaccgtggctgagcct
ggccttaccatcagctgggtcttctcttctgatcccaagagcatctccttcagtgtggtc
ttccaagagacagaagacactccactggaccagtgcaaggtcctcattcccaccacccga
tgcaattcccacaaggagagcatccggggccagctgaaggtccgaatccctggcatctac
ttgctcatctttgacaacaccttttccagattcatctccaaaaaagtattttaccacctg
actgttgaccggcctgtgatctacgatggaagcgatttcccatag
DBGET
integrated database retrieval system
