Mus pahari (shrew mouse): 110327961
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Entry
110327961 CDS
T05929
Symbol
Mmp13
Name
(RefSeq) collagenase 3
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04657
IL-17 signaling pathway
mpah04926
Relaxin signaling pathway
mpah04928
Parathyroid hormone synthesis, secretion and action
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09150 Organismal Systems
09151 Immune system
04657 IL-17 signaling pathway
110327961 (Mmp13)
09152 Endocrine system
04926 Relaxin signaling pathway
110327961 (Mmp13)
04928 Parathyroid hormone synthesis, secretion and action
110327961 (Mmp13)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mpah01002
]
110327961 (Mmp13)
Peptidases and inhibitors [BR:
mpah01002
]
Metallo peptidases
Family M10
110327961 (Mmp13)
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_4
Reprolysin_5
DUF4953
Motif
Other DBs
NCBI-GeneID:
110327961
NCBI-ProteinID:
XP_021062936
Ensembl:
MGP_PahariEiJ_G0014629
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All DBs
Position
10:3583399..3594251
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AA seq
472 aa
AA seq
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MHSAILATFFLLSWTHCWSLPLPYGDDDDDDLSEEDVGFAEHYLKSYYHPVTLAGILKKS
AVTSTVDRLREMQSFFGLEVTGKLDDPTLDIMRKPRCGVPDVGEYNVFPRTLKWSQTNLT
YRIVNYTPDMPHSEVEKAFRKAFKVWSDVTPLNFTRIYDGTADIMISFGTKEHGDFYPFD
GPSGLLAHAFPPGPNYGGDVHFDDDETWTSSSKGYNLFIVAAHELGHSLGLDHSKDPGAL
MFPIYTYTSKNHFMLPDDDVQGIQSLYGPGDEDPNPKHPKTPEKCDPALSLDAITSLRGE
TMIFKDRFFWRLHPQQVEAELFLTKSFWPELPNHVDAAYEHPSRDLMFIFRGRKFWALNG
YDILEGYPRKISDLGFPKEVKRLSAAVHFEDTGKTLFFSGNHVWSYDDVNQAMDKDYPRL
IEEEFPGIGNKVDAVYEKNGYIYFFNGPIQFEYSIWSNRIVRVMPTNSILWC
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcattcagctatcctggccaccttcttcttgttgagctggactcactgctggtccctg
ccccttccctatggtgatgatgatgatgatgacttgtctgaggaagatgttgggtttgca
gagcactacttgaaatcatactaccatcctgtgactcttgcgggaatcctgaagaagtct
gcagtgacctccacagttgataggctccgagaaatgcaatctttctttggcttagaagtg
actggcaaacttgatgatcccaccttagacatcatgagaaaaccaagatgtggagtgcct
gatgtgggtgaatacaatgttttccctcgaacactcaaatggtcccaaacgaacttaact
tacaggattgtgaactatactcctgatatgccccattctgaagtggagaaggccttcaga
aaagccttcaaggtctggtctgatgtgacaccactgaatttcaccagaatctatgatggc
actgctgatatcatgatatcttttgggactaaagaacatggtgacttctacccatttgac
ggaccttctggtcttctggcacatgcttttcctcctggaccaaactatggtggggatgtc
cattttgatgatgatgaaacctggacaagcagttccaaaggctacaacttgtttattgtt
gctgcccatgagcttggccactccctaggtctggaccactccaaggacccaggagccctg
atgtttcccatctatacctacactagcaaaaaccatttcatgcttcctgatgatgacgtt
caaggaatccagtctctttatggtccaggagatgaagaccccaaccctaaacatcccaaa
acaccagagaagtgtgacccagccctatcccttgatgccattaccagtctccgaggagaa
accatgatctttaaagacagattcttctggcgcctgcaccctcagcaggttgaggctgag
ctgtttttgacaaagtccttttggccagaacttcccaaccatgtcgatgctgcatatgaa
catccatcccgtgaccttatgtttatctttagagggagaaaattctgggctctgaatggt
tatgacattctggaaggttatcccagaaaaatatctgacctgggatttccaaaagaggtg
aagaggctgagcgccgcggttcactttgaggacaccgggaagaccctcttcttctccggg
aaccacgtgtggagttatgatgatgttaaccaggctatggacaaagattatccccgcctc
atagaagaggaattccctggaattggcaacaaagtagatgctgtctatgagaaaaacggt
tatatctactttttcaatgggcccatacagtttgaatacagtatctggagtaatcgcatt
gtgagagtcatgccaacaaattccatattgtggtgctaa
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