Mus pahari (shrew mouse): 110330278
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Entry
110330278 CDS
T05929
Symbol
Hps6
Name
(RefSeq) Hermansky-Pudlak syndrome 6 protein
KO
K20192
Hermansky-Pudlak syndrome 6 protein
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpah04131
]
110330278 (Hps6)
Membrane trafficking [BR:
mpah04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
110330278 (Hps6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS6_C
HPS6
PTHB1_CtH
Motif
Other DBs
NCBI-GeneID:
110330278
NCBI-ProteinID:
XP_021065958
Ensembl:
MGP_PahariEiJ_G0014514
LinkDB
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Position
1:157352487..157355163
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AA seq
805 aa
AA seq
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MKRAGTLRLLSDLSNFTGAARLRELLAGDPAVLVRCSPDGRHLLLLRPPGSPAPQLLVAV
RGPGLPLERAWPEGDPSPLDVFFVPWLARPALILVWESGLAEVWGVGMEPGWKLLQSTEL
CPGGGARVMAVAATRGRLVWCEERQPGVEDQPEQLSTAFSHRVCFKTLETSGEAGTKLGC
THILLHHCPSFGLIASRKDFFLVPTTNTWAGVAHVLLIWSPSKGKVIVAAPSLGLSHSKS
LNPKQGDTWDFRTLLRGLPGFLSPREPLDVHTWAPSSQGLLLLDLKGKVSLVQCHGGTRT
VGILQEAPVGLEGSAALGTFHGTLACVMGSTLELLDMSSGRLLERKVLSTDRVHLLEPPA
PGMKTEEELETRGALRLLSALGLFCVCWEVPQGLELPSDKDLVFEEACGYYQRRSLRGTQ
LTPEELRHNSMFRAPQALASILQGHLPPSTLLTTLRAELRDYRSIEQLKAQLVAGDDEEA
GWTELAEQEVARLLRTQLTGEQLAQFNTIFQALPTAAWGATLQALQLQPDRSGRLRSQAP
PDVWKKVLRAPAAGKEHPNGILPPFELLCQCLGQLEPQWLPPFVKLAQQQGGPGWGAEGP
SLPLYRRALAVLGEEGKRPEALELELLLGSGRPKAVLQAVRQLIEKEEWGRALEAGLALD
ASSPLLRSEIFKLLLAEFAQHRHLDAHLPLLCRLCPPEVAPHELLLLLRTHLPDDEGTTP
FPEPEAEPPLTVGLVRALLEQTGAQGRPSGPVQSTYEDILWDPGTPPPTPPRGPTASLQA
SDHPGQEAWVPSGQGLGAADLGVHL
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtgcaggaactctgcgcctgctttcggatctgagcaacttcaccggcgcggcc
cggctccgcgagttgttggcgggggacccagctgtcctagtccgctgcagccctgacggc
cgccacttgctgctgttaagaccccccgggtcgcccgccccgcaacttctagtggccgtg
cgtgggccgggcctgccgctggagcgtgcctggccggagggcgacccctcgccgctggac
gtctttttcgtgccgtggctggcgcgccccgcgctgatcttggtatgggagagtggccta
gcagaggtgtggggcgtggggatggagcctggttggaagctacttcagagcactgagttg
tgtccgggtggtggagcccgcgtgatggccgtggccgcaacccgaggccgcctagtttgg
tgcgaggagcgtcagccgggcgttgaggaccaaccagagcagctttcaaccgccttcagc
caccgtgtgtgcttcaagaccctggaaaccagcggggaggctggcaccaaactaggctgc
acccacatcctgctacaccattgcccctcttttggactgatagcctcccgcaaggacttc
ttcctggtgcctactaccaacacttgggctggtgtggcccacgttctgctcatctggagc
ccaagcaaggggaaggtaatagttgctgccccatctctcggtctttcacacagtaaaagc
ttgaatcccaaacaaggggacacttgggactttcggaccctgctgcgaggccttcctgga
ttcctgtcccccagggagccactggatgtacacacttgggccccatcttcgcagggcttg
ttgttgcttgacttgaaagggaaggtaagcctagtacagtgccacggtggtactcgaacc
gtgggaatcctgcaggaggcccctgtaggcctagaagggtctgcagccctggggacattt
cacggcactttagcttgcgtcatgggctccaccttggaactactggacatgagcagtggg
cggctgttggaaaggaaggttctcagtacagacagagtacatctgctggaacctcctgcc
cctggcatgaaaaccgaggaagagctggagacccgaggagccctgcggttgctttcagcc
ttgggtctcttttgtgtgtgttgggaagttccccaaggccttgagctgccctctgacaag
gacttggtgtttgaggaggcctgtgggtactaccagcgtcggagccttcgaggtacccag
cttaccccagaagaactgagacacaacagcatgtttcgggcacctcaggccctggcctcc
atcctccagggccacctgcccccgtctacactcttgacaaccctgagggctgagctccgg
gattatcggagtatagaacagctcaaggcccagctggtggctggggacgatgaggaggct
ggctggactgagttagcggagcaggaggtggcccgcctgctgagaacccagttgacagga
gaacagctggcccaattcaacaccattttccaagcccttcctacagcggcttggggtgcc
actctccaggccctgcagctccagccagataggagtggcaggctgaggtcccaagcacct
ccggatgtatggaagaaggtcctaagggctccagcagctggaaaggaacaccccaatgga
atactgccgccctttgaactcctgtgtcagtgcctgggccagctagagcctcagtggctc
ccgccatttgtgaaactggcacagcagcagggtggtccaggctggggggctgaaggcccc
agtctgcccctttaccgccgagccctggcagtgctaggtgaggaagggaagagacctgaa
gctctggaactcgagctgcttctgggcagtgggcgacccaaagctgtgctacaagcggta
aggcagctgatagaaaaagaagagtggggacgggccctggaggccggcctggccctggac
gcctctagccccctgcttcgaagtgagatctttaagctgctgctggcagagtttgcccag
caccgccacctggatgcacacctcccgctcctctgtcgcctgtgcccaccggaagtggct
ccacatgagctcctgcttctgctgaggacacacctcccagatgatgagggaaccacccct
ttccctgagcctgaggccgagccccctctcacagtgggcttggtcagagccctgctggaa
cagactggggctcaaggaaggccctccggcccagttcaaagcacctatgaggacatccta
tgggacccaggcactccaccgcctacgccacctcgtggacctactgcttctctccaggcg
tcagaccacccaggacaggaagcctgggtaccatctggacaggggctcggtgcagctgac
ctgggagttcatttgtag
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