KEGG   Mus pahari (shrew mouse): 110331543
Entry
110331543         CDS       T05929                                 
Symbol
Smcr8
Name
(RefSeq) guanine nucleotide exchange protein SMCR8
  KO
K23611  guanine nucleotide exchange protein SMCR8
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah04140  Autophagy - animal
mpah05014  Amyotrophic lateral sclerosis
mpah05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    110331543 (Smcr8)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    110331543 (Smcr8)
   05022 Pathways of neurodegeneration - multiple diseases
    110331543 (Smcr8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mpah04131]
    110331543 (Smcr8)
Membrane trafficking [BR:mpah04131]
 Autophagy
  Other autophagy associated proteins
   Rab associated proteins
    110331543 (Smcr8)
SSDB
Motif
Pfam: Folliculin
Other DBs
NCBI-GeneID: 110331543
NCBI-ProteinID: XP_021067900
Ensembl: MGP_PahariEiJ_G0017593
LinkDB
Position
14:28826278..28833493
AA seq 935 aa
MISAPDVVAFTKEDEYEEEPYNEPALPEEYSVPLFPYASQGANPWSKLSGAKFSRDFILI
SEFSEQVGPQPLLTIPNDTKVFGTFDLNYFSLRIMSVDYQASFVGHPPGSAYPKLNFVED
SKVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYISADQHKIMQQFQELSAEFSKAS
ECLKMGNRKAFAGELEKKLKDLDYTRTVLHTETEIQKKANDKGFYSSQAIEKANELANVE
KSIIEHQDLLRQIRSYPRQKMKIPDLHTGDTEHTQDQADQVSTTSNPEESANADLYTCRP
AYTPKLIKAKSTKCFDKKLKTLEELCDTEYFTQTLAQLSHIEHMFRGDLCYLLTSQIDRE
LRKQQPITNFLFEDFVEVDDRMEKQENVPSQPSQDRLPPKPVEECPIPKVLISVGSYKSS
VESVLIKMEQELGDEEYKEVDATEARGFDPQENLDYLDMDMKGSISSGESIEVLGTEKSA
SVLSKSDSQASLTVPLSPHVVRSKAVSHRTISEDSIEVLSTCPSEALIPDDFKASYPSAI
NEEEAYADNEGAIHFRASASSPELDETQEGNLENIPSQIDSSCCIGKESEGQLVPLPTPA
YTLSDEDGVVSIPPQRYIQKDQGLHVDFGMENTDPSPRDNSCEMFPAYELDPSCLLASRD
VSKMSLDNYSDTTSYMGSVASASSDRIPSVPPAGLSSERHKKRAGQNALKFIRQYPFAHP
AIYSLLSGRTLVVLGEDETIVRKLVTALSIFVPNYGCYAKPVKHWISSPLHIMDFQKWKL
IGLQRVASPANVGTLHTLSRYSRYTSILDLDSKTLRCPLYRGTLVPRLADHRTQIKRGST
YYLHVQSMLTQLCSKAFLYTFCHHLHLPAHSEETQEAVASRQTSFLKLTLGLVNEDVRVV
QYLAELLKLHYMQESPGATHPLLRFDYVPSFLYKI
NT seq 2808 nt   +upstreamnt  +downstreamnt
atgatcagcgcccctgatgtggtggccttcaccaaggaagacgaatatgaggaagaacct
tacaatgagcccgctttgcctgaggagtactctgtccctctctttccttatgccagccag
ggagcaaacccctggtctaaactgtctggggccaagttctccagggacttcatcctcatt
tccgagttctctgagcaggtgggaccccagcctttgcttaccatccccaatgacaccaag
gtttttggcacttttgatcttaattacttctctttgcggattatgtcggtagattaccag
gcttcgttcgtaggccatccccctggttctgcctaccccaagttgaactttgtggaagac
tctaaagtggtactgggagattctaaggaaggggcctttgcatatgtgcaccaccttacc
ttgtatgacctggaggccaggggctttgtgaggcccttttgtatggcttatatctctgca
gaccagcataaaatcatgcaacagttccaagagctttcggccgaattttccaaagcatct
gagtgcttgaagatgggcaacaggaaggcattcgctggggaacttgaaaaaaagctgaaa
gacttggattacacgaggacagtgctacacacagaaaccgagatccagaagaaagccaat
gacaagggtttttattcttctcaggcaattgagaaagccaatgaactggccaatgtggag
aagtccatcattgaacatcaagatttgctgaggcagatccgctcataccctcgtcagaag
atgaagatacctgacttgcatactggtgatacagagcatacccaggatcaggctgaccag
gtatccactacctctaatcctgaggagtctgctaatgcagacctttatacctgcagaccg
gcttacacccccaaactcatcaaagcaaagtccaccaagtgttttgacaagaagttgaag
accttggaggaactctgtgacactgagtatttcactcagaccctggcccagcttagccac
attgaacacatgttcagaggagacctgtgctacctcctgaccagtcagattgacagagag
cttcgaaaacaacaacccataacgaatttcctctttgaagattttgtagaggtggatgac
aggatggagaagcaagagaatgtgccctctcagcctagtcaggacaggctgcctcccaag
cctgtagaagaatgccccattcctaaagtgttaattagtgttggctcttacaagtccagt
gtggagtctgtattgatcaagatggagcaggaactgggagatgaagagtacaaggaagtg
gatgcaacagaggcacgtggttttgacccccaagagaacctggactacctggatatggac
atgaaagggagcatcagtagtggggaaagcatcgaggttctgggcaccgagaagtcagcc
tctgtgttgtcgaaatctgacagccaggccagcctcaccgtgccattgagcccccatgta
gtccgtagcaaagcggtcagccacaggacaatcagcgaggacagcattgaagtcttaagc
acctgcccttctgaggccctcattcctgacgactttaaggccagctacccaagtgccatt
aatgaagaagaagcctatgcggataatgagggggccatccatttccgggcaagtgccagc
tcaccagaactggatgagactcaggagggcaacttggaaaatatcccatcccaaatagac
tccagctgctgtattggaaaagagagtgaaggccaattggtgcctctcccaaccccagcc
tacactctttctgatgaggatggtgtagtgagcattcccccacagcgctacattcagaag
gaccaggggctccacgtggactttggaatggaaaacactgacccttctccccgagacaac
agttgtgaaatgttcccagcttatgagctggatccaagctgccttctggctagccgagat
gttagtaagatgagcctggataactactcggataccactagctacatgggcagtgtggcc
tctgccagctcggacagaatcccctctgtacctcctgctggcctatcctctgagaggcac
aaaaagagagctggccagaatgccttaaaattcatccgccagtacccttttgcccaccca
gccatttactccctgctcagtgggaggacacttgtggtccttggtgaagatgaaaccata
gtcaggaagctggtaactgcactgtccatctttgttcccaactatggctgctatgccaag
ccggtgaagcactggatttcttcccctttgcatattatggattttcagaagtggaagctt
attggcctacaaagagtggcctctcctgccaatgtgggtaccctccataccctgagccgt
tacagccgctatacaagcatcctggacctggacagcaagaccctacgctgtcccctgtac
aggggcacactggtaccccgcctggctgaccatcgcactcagatcaagcggggcagcaca
tactaccttcacgtccagagcatgctcacccagctctgctccaaggcattcctctacacc
ttttgccaccacttgcatctgcccgcccacagtgaggagacacaagaagcagtggccagc
agacaaaccagcttcctaaagctaaccctgggactcgtgaatgaggacgtcagagtggtc
cagtacctggctgagctgttgaaactacattatatgcaggagtcacccggggccactcac
ccactgctcaggtttgactacgtccccagctttttgtacaaaatctaa

DBGET integrated database retrieval system