Mus pahari (shrew mouse): 110331568
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Entry
110331568 CDS
T05929
Symbol
Rapgef6
Name
(RefSeq) rap guanine nucleotide exchange factor 6 isoform X1
KO
K08020
Rap guanine nucleotide exchange factor 6
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04015
Rap1 signaling pathway
mpah04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
110331568 (Rapgef6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
110331568 (Rapgef6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RA
cNMP_binding
RasGEF_N
PDZ
PDZ_6
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
110331568
NCBI-ProteinID:
XP_021067945
Ensembl:
MGP_PahariEiJ_G0017494
LinkDB
All DBs
Position
14:22539857..22712044
Genome browser
AA seq
1609 aa
AA seq
DB search
MNSPVDPGARQALKKKPPERTPEDLNIIYSYLHGMEILSNLREHQLRLMSTRARYERYSG
NQMLFCSETIARCWYILLSGSVLVKDSMVLPPCSFGKQFGGKRGCDCLVLEPSEMIVVEN
SKDNEDSILQREIPARQSRRRFRKINYKGERQTIIDGVDINNYLTLPADLTKMHLTDNPH
PQVTHVSSSQSGCSIASDSGSSSLSDIYQATESEVGDVDLTRLPEGPVDSEEEEEEEEEI
DRTDPLQGRDLVRECLEKEPADKTDDDVEQLLEFMHQLPAFANMTMSVRRELCSVMVFEV
VEQAGAVILEDGQELDSWYVILNGTVEISHPDGKIENLFMGNSFGIVPTLDKQHMHGVVR
TKVDDCQFVCIAQQDYWRILNHVEKNTHKVEEEGEIVMVHEHRELDRSGTRKGHIVIKAT
PERLIMHLIEEHSIVDPTYIEDFLLTYRTFLETPLDVGIKLLEWFKIDSLRDKVTRIVLL
WVNNHFNDFEGDPAMTRFLEEFERNLEDTKMNGHLRLLNIACAAKAKWRQVVLQKASRES
PLHFCLTGGSEKGFGVFVEEVESGSKASDAGLKRGDQVMEVNGQNFENITLAKALEILRN
NTHLALTVKTNIFVFKELLSRTEQEKSGVPHIPKIAEKKSNRHSIQDVPGDMEQAPQEKG
NKKIKANTVSGGRNKIRKILDKTRFSILPPKLFSDGGLSQSQDDSIVGTRHCRHSLAIMP
IPGTLSSSSPDLLQPTTSMLDFSNPSDIPDQVIRVFKADQQSCYIIISKDTTAKEVVCQA
VQEFGLTGASDTYSLCEVSVTPEGVIKQRRLPDQFSKLADRIQLNGRYYLKNNMETETLC
SDEDAQELLKESQLSILQLSTVEVATQLSMRDFDLFRNIEPTEYIDDLFKLDSKTGNTHL
KQFEDIVNQETFWVASEILSESNQLKRMKIIKHFIKIALHCRECKNFNSMFAIISGLNLA
PVARLRGTWEKLPSKYEKHLQDLQDLFDPSRNMAKYRNILSSQSMQPPIIPLFPVVKKDM
TFLHEGNDSKVDGLVNFEKLRMIAKEIRHIIRMTSANMDPAMMFRQRKKRWRSLGSLSQG
STNSNMLDVQGGAHKKRARRSSLLNAKKLYEDAQMARKVKQYLSSLDIDTDEEKFQMMSL
QWEPAYGTLTKNLTEKRSAKSSEMSPVPLRSGGQTAKVHVHQPHRVSQVLQVPAVNLHPI
RKKGQAKDHVLSTSLPQKGLGPTEEVSVKKHTEDAISVASSLHSSPPASPQNSPRKGYTL
TPSSKCDNLSDSSHSEISSRSSIVSNGSVDSMSAAGQDERCSSHSLALPEPTGALDKTDH
PSGISDHCQLAHGWMLSKPCLIKGVAVSSSLSSEEMSHEHVVLEAADSGRGSWTSCSSSS
HDNFQSLQNQKSWDFLNSYRHMHLDDPIAEVDPTDCEPCACPKGCSRTCGQCKGSLETNQ
LRKSWASSSSLSDTCEPNYGTVKRRALESAPAEAPDGLAPRDTTDPVYKTVTSSTDKGLI
VYCVTSPKKGDRYREPPPTPPGYLGISLADLKEGPHPHLKPPDYSVAVQRSKMMLNSLSR
LPPAPPSSHTSAWVPSKIGSQPQRHSHPKLADVADADSEADENEQVSAV
NT seq
4830 nt
NT seq
+upstream
nt +downstream
nt
atgaactcgcccgtggaccccggcgctcggcaggcactgaagaagaagccgccggagcgg
actcctgaggacttaaatattatttattcttatctccatgggatggaaatactatcaaac
ctcagggagcatcagctcaggttaatgtctacaagagcacgctatgagaggtacagtggc
aatcaaatgcttttttgttcagaaactatcgccagatgttggtatatcctgctttctgga
tccgtacttgtaaaagattctatggttcttcctccttgcagttttggtaagcagtttgga
ggaaaaagaggatgtgattgtcttgtattagagccttcagagatgattgtggtagagaat
tccaaagataatgaagatagtattttacaaagagaaattcctgctagacagtctcgacga
aggtttcggaaaattaactataaaggagaacgccaaaccataatagatggggtggatatt
aataactaccttacgcttccagctgatcttaccaagatgcacctcacagacaaccctcat
ccacaggtgactcatgtgtcttctagtcagtctggctgtagcattgccagtgactctggg
agcagcagtttatccgatatctatcaggctacagagagtgaagtaggagatgtagattta
acacgtcttccagaaggacctgttgattctgaggaggaagaggaagaggaagaagagatt
gatcgaacagatccactgcagggtcgagatcttgttcgggagtgtcttgaaaaggaaccc
gcagacaaaactgatgatgacgttgagcagttactcgagttcatgcaccagctgcctgcc
tttgcgaacatgaccatgtctgtgaggagggagctctgctctgtcatggtctttgaagta
gtagagcaggccggggctgttattcttgaagatgggcaagagcttgactcatggtatgtc
attttaaatggcactgtagaaattagtcatccagatgggaaaattgaaaatctcttcatg
ggaaatagttttggaattgtccccactctggataagcagcacatgcatggagttgtcagg
accaaggtcgatgattgtcagtttgtctgcatagcccaacaagactattggagaatttta
aatcatgtggaaaagaatacccacaaagttgaggaagagggagagattgtcatggtacat
gagcaccgtgaactagaccggagtggaaccagaaaaggacacattgtaatcaaggcaaca
cctgagcgtctcatcatgcatttgatagaagaacattctattgtggacccaacatatata
gaagatttcctattaacttacaggacatttcttgaaactcctttggatgttgggatcaag
cttttggagtggtttaagattgacagtttaagggataaggtgacccggattgtactctta
tgggtaaataatcattttaatgattttgaaggtgatcctgctatgactcgatttctagaa
gaatttgaaagaaatttggaagatacaaaaatgaatggtcacctcaggttattgaatatt
gcctgtgctgcaaaggctaagtggaggcaagttgtactgcagaaggcgtcccgtgagtcc
ccgctgcacttctgccttactgggggcagtgagaaaggatttggagtctttgttgaagaa
gtagaatctggtagcaaagcttctgacgcaggactgaaacggggtgatcaggtaatggaa
gtcaatggacaaaactttgagaatattacacttgctaaagcccttgaaattttgagaaat
aatactcatcttgcacttactgtgaagaccaacatttttgtgttcaaagaattgctcagt
aggactgaacaagagaaatctggtgttcctcatattcccaaaattgctgaaaaaaaaagt
aatcgacattcaattcaagatgtcccaggggatatggagcaggcaccacaggagaaagga
aataagaaaattaaagcaaataccgtttcaggtggaagaaacaaaatcagaaaaattttg
gataaaacacgatttagtatcttgcctccaaaactatttagtgacggaggcctgagtcaa
tcacaagatgacagcattgtgggaaccaggcactgtaggcacagcctggctataatgcca
attcctggaacactttcatccagcagcccagatctgttacagcctaccactagcatgttg
gacttttccaatccttcagatattcctgatcaagttataagagttttcaaagcagatcaa
caaagttgctacattatcatcagtaaagataccacagctaaagaagtggtctgccaagct
gtacaggaatttggtttgactggtgcatctgacacatactccctctgtgaagtttctgtt
actcccgagggtgttataaagcagagaagacttccggaccagttctccaaattagctgat
agaattcaactcaatggaagatattacctaaaaaataacatggaaacagaaacattgtgt
tctgatgaagatgctcaggagctacttaaggagagccagctatccatactgcagctcagt
actgtcgaggtcgccacccagctgtcaatgagagacttcgatttatttcgtaatattgaa
cctactgaatacattgatgatctctttaaattagattccaaaacaggaaatactcacttg
aagcaatttgaggatattgtaaaccaagagacattctgggttgcctcagagattttaagt
gaatcaaatcagctgaaaagaatgaagattattaaacattttattaaaattgctcttcat
tgccgagaatgcaagaatttcaattccatgtttgcaataataagtggcttgaacctggca
ccagttgcacgactcagaggcacttgggaaaagttaccaagcaaatatgagaaacatctt
caagatctacaagacctttttgatccatctagaaatatggcaaaatacagaaatattctt
agtagtcaaagcatgcagcctccaattattccactcttccctgttgtcaagaaagatatg
acatttctccatgaaggaaatgactccaaagtagatggcttagtaaacttcgagaagcta
agaatgattgccaaggaaatccgtcatattattcgaatgacttctgccaacatggatcct
gccatgatgttccgtcagaggaagaagaggtggcggagtctggggtcgttgagtcaaggc
agcacaaattctaacatgctagatgtccagggaggtgctcacaagaaaagagcacgccgc
agctcactgctgaatgccaagaaactgtatgaagatgcccaaatggcaaggaaagtaaaa
cagtatctttctagtctggacatagacacagatgaggagaagttccagatgatgtcactg
cagtgggaacctgcgtatggtaccttgacaaagaacttaactgaaaaaaggtcagccaaa
tcatctgagatgtctcctgtgccattgaggtcaggtggccaaacagctaaagtccacgtg
catcagccacacagagtgagccaggtgcttcaggtgccagcagttaacttgcaccccatc
cggaagaaaggacaagccaaagaccatgtgctgagtacaagtttacctcagaaaggttta
ggaccaactgaagaagtgagtgttaagaaacacacagaagacgctatttctgtagcatcc
tctctgcactctagccctcctgcatctcctcagaactccccacgcaaaggttatacactc
acaccatcaagtaaatgtgacaacttgtctgactccagccacagtgaaatctcctctcgg
tccagcattgtgagcaatggttctgttgactccatgtctgcagctgggcaggatgaacgc
tgttcctcccacagcctggcacttcctgagcccacgggggcattggacaagacagaccac
ccttcggggatctcagaccactgtcagcttgctcacgggtggatgctgtcaaagccatgt
cttatcaagggtgttgctgtctcatcttctctgagcagcgaagagatgtctcatgagcat
gttgtgctggaagcagctgacagtggtcggggtagttggacttcctgttccagcagctcc
catgacaacttccaaagccttcaaaatcaaaaaagctgggacttcctgaattcttacaga
cacatgcatttagatgaccctattgcagaagttgatcccactgactgtgagccctgtgcc
tgtcctaaaggctgctcaagaacttgtggccagtgcaaaggcagcctagagacgaaccag
ctgaggaagagttgggcctcctccagctcactgtctgacacatgtgaaccgaactacgga
acagttaagcggagggcgttggaaagtgcaccagcagaggcacctgatggcttggcgccc
agggataccactgaccctgtttataaaactgtcacttccagtacagacaagggcttgatt
gtgtactgtgtcacctcacccaagaaaggtgataggtatagggagccacctcccactcct
ccaggatatctgggaatttctttagcggacctaaaggaaggaccccacccgcacctaaaa
cctccagactatagtgtggcagtacagagatcaaagatgatgcttaacagcctgtctaga
ctgccgccagctcctcccagtagccacacttcggcctgggttccctcgaagattggatcc
cagcctcaaaggcatagccatcccaaactagcagatgtggctgatgcagatagcgaagca
gatgaaaacgagcaggtgtcagcagtctag
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