Mus pahari (shrew mouse): 110331622
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Entry
110331622 CDS
T05929
Name
(RefSeq) LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-containing protein 1b allele 3-like
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
110331622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpah04131
]
110331622
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mpah04054
]
110331622
Membrane trafficking [BR:
mpah04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
110331622
Pattern recognition receptors [BR:
mpah04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
110331622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FIIND
NACHT
NLRC4_HD2
CARD
NOD2_WH
LRR_6
NB-ARC
nSTAND3
AAA_16
AAA_22
LRR_1
AAA_30
Zeta_toxin
AAA_14
AAA_18
AAA
Motif
Other DBs
NCBI-GeneID:
110331622
NCBI-ProteinID:
XP_021068050
Ensembl:
MGP_PahariEiJ_G0017792
LinkDB
All DBs
Position
14:complement(39020964..39065701)
Genome browser
AA seq
1172 aa
AA seq
DB search
MEESPPKQKSNTKVAQHESQXDLSTTRHMNVELKHRPKPERHLKLGIFSKVCMKQGKEIL
YPAWSLKEENLIQNFTCLLLLQKLIPKDSENLVRKSWHSCVPEEGGHMINIQDLFGPNIG
VQKEPQLVIIEGAAGVGKSTLARMVKRAWKEGQLYRDRFQHVFFFSCRELAQHKQLCLVE
LIAQGQEVPTTPIRQILSQPEKLLFILDDIDEPAWDLEEQNPELCLHWSQRQPVHTLLGS
LLGKSILPEASFLLTTRTTALQKFIPSLPQTCQVEVLGFSESEREKYFYKYFANQRVAIT
AFMVVVSNRVLLTLCEVPWVCWLVCSCLKKQMDQGRVLSLTSQTTTALCLKYLSLTIPGQ
HMRTQLRALCSLAAEGIWKRRTLFSESDLCKQGLAEDAIATFLETGVLQKQPSSLSYSFA
HLCLQEFFAAMSYILEDSEERHGDMEIDRIVETLVERYGRQNLFEAPTVRFLFGLLSKEG
LKEMKKLLSYSLPGKTKLKLLWHILGKSQPHQPPCLGLLHCLYENQEIELLTHVMHDLQG
TIVPEPNDIACTVSQTNVKHLVIQTDMDFMVVTFCIQFCCHVRSLQLNMGRQQGYALTAP
RMVLYRWTPISDASWKIFFYNLKFNRNLEELDLSGNPLSYSAVQSLCQTLRFPDCQLKTL
WLVECGLTSTSCSLLASVLSASSSLTELDLQKNDLGDSGVRMLCEGLRNPACNLSILWLD
QASLSAQVITELRTLEEKNPKLHISSMWMPHMMVPTENMNEEDILTSFEQQRQQSGDKPM
ELLGTEEDFWGPTGPVATEVVDRERNLYRVQLPMAGSYHCPSTGLHFVVRRAVTIKIEFC
AWSQFLDKTPLHQSHMVAGPLFDIKAEQGAVTEVYLPHFVSLQDTEASTFDFRVAHFQKH
GMVLETPDSVKPGYTVLKNPSFSPVGVVLRIIPAARHFIPITSITLIYYRLNQEEVTLHL
YLVPNDCTIQKAIDDEEVKFQFVRINKPPPVDNLFIGSRYIVSGSENLEITPKELELCYR
SSKEFQLFSEIYVGHMGSEIKLQIKTKKHMKLIWEAWLKPGDFRPALPRITQAPKDAPSF
LHFMDQHREQLVARVTLVDPLLDKLHGLVLNEESYEAVRTETTTENKMRKLFSLSRSWSP
DCKDRFYQALKETHPHLVMDILEKSGGVSLGS
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggaagaatccccgcccaagcagaaaagtaacacaaaggtggctcagcatgagagtcaa
taagacttgagcacaacaagacatatgaatgtagagctgaagcacagacccaagccagag
agacacttgaagctaggtatattttcaaaagtatgtatgaagcagggaaaagagatactt
tacccagcatggtcattgaaagaggagaatttgatccaaaatttcacatgcctactactc
cttcaaaaattgatcccaaaagactcagagaacttggtcaggaaaagctggcattcatgt
gtaccagaagaaggaggacatatgattaatatccaagacttatttggaccaaatataggt
gttcagaaagagcctcaattagtcataatagagggggctgctggggttgggaagtcaaca
ctggccaggatggtgaagagagcctggaaggaaggccaactctacagggatcgcttccag
catgtcttcttcttcagctgcagagagctagcccagcacaagcagctgtgtctggttgag
ctcatagcacaaggccaggaagtgcccacaactcccatcaggcagatcctgtctcagcct
gagaagctgctcttcatcctggatgacatagatgagccagcatgggacttggaggaacag
aatcctgagctatgtctgcactggagtcaaagacagcctgtgcacacactgttgggcagt
ttactagggaaatctatcctccctgaagcttccttcttgctcacaactcgcaccacagct
ctacagaagttcattccttctttgccacagacatgtcaagtggaagtcctaggattcagt
gagtctgaacgggagaaatatttctacaaatattttgcaaatcaaagagttgcaattact
gcttttatggtggttgtctctaaccgagtgctcctgaccctgtgtgaggttccctgggtg
tgctggttggtctgctcttgcctgaaaaagcagatggaccagggtagagtactctcactg
acctcacagaccaccacagccctctgcctgaaatacctttccctgacgatcccagggcag
cacatgaggacccagctcagagccctctgctcattggctgctgaaggcatctggaaaaga
aggaccctgttcagtgagagcgacctctgtaagcaagggttagcagaggatgccattgcc
actttcctggagactggtgtccttcaaaagcagcccagctctctgagctacagctttgcc
cacttgtgcctccaggagttctttgcagccatgtcttacatcttggaggatagtgaggaa
agacatggtgatatggaaatcgacagaattgtggaaacactggtagaacgatatggaaga
caaaacctgtttgaggcacccactgtgcgctttctgtttggtcttttgagtaaagaggga
ttgaaagaaatgaaaaagctcctttcctacagccttcctgggaagacaaagttgaagctg
ctatggcacatcctagggaaatcccaaccccatcaaccaccttgcctgggtttgctccac
tgtctctatgaaaatcaggaaattgagctcctgacacacgtgatgcatgatctgcaagga
acaatagtgcctgagccaaatgacattgcatgcacagtgtctcagacaaacgtgaagcac
ctggtgatacagacagacatggatttcatggtggtcactttctgcattcagttctgctgt
cacgtgaggagtctacagctgaatatgggaagacagcaaggatatgcactgacagccccg
aggatggttctgtacaggtggaccccaatctctgatgccagttggaagattttcttctac
aatcttaaattcaacagaaatctggaggagttggacctcagtggaaatccactgagttac
tctgcagtgcaaagtctctgtcagaccctgagattccctgactgccaactaaagaccttg
tggcttgttgaatgtggcctcacatccacatcctgctcactcctggcctcagtgctaagt
gccagctccagcctgactgagctagacctgcagaaaaatgacctaggtgacagtggtgtg
aggatgctgtgtgaggggctcaggaatccagcctgcaacctcagcatcctgtggctggac
caggcctctctcagtgcccaggtgattacagaactcaggaccctggaggaaaagaatccg
aagctgcacatctccagcatgtggatgccacacatgatggtccccactgagaacatgaat
gaagaagatatcctgacctcattcgagcagcagagacaacagtcgggagacaagcccatg
gaacttctggggactgaagaagacttctggggccctacaggacctgtggctactgaggtg
gttgacagagagaggaacctgtaccgagttcagttgcccatggctggttcctaccactgt
cccagtacaggactccactttgtggtgagaagggcagtgacaatcaagattgaattctgt
gcctggagccaattcctggacaagactcccttgcaccagagtcacatggtggctggacct
ctgtttgacatcaaggctgagcaaggagctgtgactgaagtgtaccttcctcattttgta
tccctccaagacacagaggcaagcacatttgacttcagggtggcccactttcaaaaacat
gggatggttctagaaacaccagatagtgtgaagcctggctacacagtactgaaaaaccca
agcttctccccagtgggagtagtactgagaataatccctgctgcccggcacttcatcccc
attacttccatcacattgatctactatcgcctcaatcaggaagaagtcacacttcacctc
tacctagtccccaatgactgcaccattcagaaggccatagatgatgaagaagtgaagttt
cagtttgtgagaataaacaagccacccccagtagacaatcttttcattggctcccgctac
attgtgtctggttctgagaacctggaaatcaccccaaaggaactagagctgtgctacagg
agcagcaaggaattccaactcttctctgagatctacgttggacacatgggttcagagatt
aagctgcaaatcaaaaccaaaaagcacatgaaactcatatgggaggcctggctgaaacca
ggagactttagacctgctctgcccaggattacccaagcccccaaagatgctccttccttt
ctacacttcatggaccagcatcgggagcagctggtggcccgagtgacattagtggaccct
ctcttggacaagctgcatggtctggtgctgaatgaagagtcctatgaggcagtgagaact
gagaccacaaccgaaaacaagatgaggaagctcttcagccttagccggtcttggagtcca
gactgcaaagatcgattctaccaagctctgaaggagacccatcctcacctggtcatggat
atccttgagaagtcgggtggggtttcattgggatcctga
DBGET
integrated database retrieval system
