Mus pahari (shrew mouse): 110331806
Help
Entry
110331806 CDS
T05929
Symbol
Nlrp1
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
110331806 (Nlrp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpah04131
]
110331806 (Nlrp1)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mpah04054
]
110331806 (Nlrp1)
Membrane trafficking [BR:
mpah04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
110331806 (Nlrp1)
Pattern recognition receptors [BR:
mpah04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
110331806 (Nlrp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FIIND
NACHT
NLRC4_HD2
CARD
NOD2_WH
LRR_6
AAA_16
NB-ARC
AAA_22
nSTAND3
LRR_1
AAA_30
AAA_14
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
110331806
NCBI-ProteinID:
XP_021068344
LinkDB
All DBs
Position
14:complement(38908526..38937925)
Genome browser
AA seq
1129 aa
AA seq
DB search
MEGGKIPKVHMKQEGETLYPTWSMKGGNLVQKLANLLIFQKLCPRTSHNLIRKSWHPFVP
EEEGHMIKIEDLFDPNIGTHKKPQLVIIEGAAGIGKSTLARQVRRAWKEGLLYRDRFQHV
FFFTCRELAQCKQLSLAEFIAKGQEVPTAPIRQILSQPEKLLFILDGIDEPAWDLEEQNP
ELCLHWSQTQPVHTLLGSLLGKSILPEASFLLTARTTALQKVIPSLEEPCWVEVLGFSEF
ERKNYFYKYFVKEKDAIIAFMVVDSNPVLLTLCEVPWVCWLVCSCLKKKKEQDGVFSLTS
QTTTALCLKYLSLTVPDELMGTQLRALCSLAAEGIWKRRTLFSESDLCKQGLAEDAIATF
LETGVLQKQPSSPSYSFAHLCLQEFFAAMSYILEIKQRHGIMEIDRIMETLVERFGRQNL
FEAPTVSFLFGLLSKEGLKEMKKFFSYRLRKLKLLKLLRHILGKSQPHQPPCLGLLRCLY
ENQEIELLTHVMHDLQGTIVSGPNDIACTVSQTNVKHLVMQTDMDLMVVTFCIQFCCHVR
SLQLNMGRQQGYALTAPRMVLYRWTPISDASWKILFYNLKFNRNLEELDLSGNPLSYSAI
QSLCKALRFPGCHLKTLWLVECGLTFGYCSYLASVLSAHSCLTELYLQKNDLSDSGVRML
CEGLRNPACNLSILRLDQASLSDQVIAELRSLEAKNPKLFISIIRKPHVMGPTMNMDKEV
GDSPAILKQQRQQSGAEHMEPLGTEDEFWGPTGPVTAEMVDKERKLYRVQLPMAGSYHCP
STGLHFVVTKAVTIEIEFCAWSQFLDKTPLHQSHMVAGPLFDIKAEQGAVTEVYLPHFVS
LQEGVVDSSMFRIAHFQEYGMVLETPARVKQHYAVLENPSFSPMGVLLRMIPAVRHFIPI
TSITLIYYHLYLEDVTFHLYLVPNDCSIRKAIDEEEMKFQFVRINKPPPVDALYLGSRYI
VSSSKLVEIIPEELELCYRSPGESQLFSEIDVGHMDSVIKLQIKDKRNMNLKWETLLKPR
DLRPAPLRIAPAPEDAPPSLHFMDQHREQLVARVTSVDSLLDKLHGLVLSEDSYEVVRAE
TTNQNKMRKLFSFSRSWSWVCKDQFYQALKETHPHLVKDILEKLGGGLC
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagggaaaattccaaaagtacatatgaaacaagaaggagagactctttatccc
acatggtcaatgaaagggggaaatttggtccaaaagctggcaaacctactaatcttccaa
aaattgtgcccaagaacatcacacaacttgatcaggaaaagctggcatccatttgtacca
gaagaagaagggcatatgattaagatcgaagacttatttgacccaaacataggtacccat
aaaaagcctcaattagtcataatagagggggctgctgggattgggaagtcaacactggcc
aggcaggtgaggagagcctggaaggaaggcctgctctacagggatcgcttccagcatgtc
ttcttcttcacctgcagagaactggcccagtgcaagcaactaagtctagctgagttcata
gcaaaaggccaggaagtgcccacagctcccatcaggcagatcctgtctcagcctgagaag
ctgctcttcatcctggatggcatagatgagccagcatgggacttggaggaacagaatcct
gagctatgtctgcactggagtcaaacgcagcctgtgcacacactgctgggaagtttgctg
gggaaatccatccttcctgaggcttccttcttgctcacagctcggaccacagctttacaa
aaggtcatcccttccttggaggagccatgttgggtggaagtcctggggttctctgagttt
gaacggaaaaactatttctacaaatattttgtgaaggagaaagacgcaattattgctttt
atggtggttgactctaacccagtgctcctgaccctgtgtgaggttccctgggtgtgctgg
ttggtctgctcttgcctgaaaaagaagaaggagcaggatggagtcttctcactgacctca
cagaccaccacagccctctgcctgaaatacctttccctgacagtcccagatgagcttatg
gggacccagctcagagccctctgttcattggctgctgaaggcatctggaaaagaaggacc
ctgttcagtgagagtgacctctgtaagcaagggttagcagaggatgccattgccactttc
ctggagactggtgtccttcaaaagcagcccagctctccgagctacagctttgcccacttg
tgcctccaggagttctttgcagccatgtcttacatcttggagattaagcaaagacatggt
attatggaaattgacagaattatggaaacactggtagaaaggtttggaagacaaaacctg
tttgaggcacccactgtgagcttcctgtttggtcttttgagtaaagagggattgaaagaa
atgaaaaagttcttctcctacagacttcgcaagttgaagttgttgaagctgctaaggcac
atcctagggaaatcccaaccccatcaaccaccttgcctgggtttgctccgctgtctgtat
gaaaatcaggaaattgagctcctgacacacgtgatgcatgatctgcaaggaacaatagtg
tctggaccaaatgacattgcatgcacagtgtctcagacaaacgtgaagcacctggtgatg
cagacagacatggatctcatggtggtcactttctgcattcaattctgctgtcacgtgagg
agtctacagctgaatatgggaagacagcaaggatatgcactaacagccccgaggatggtt
ctgtacaggtggaccccaatctctgatgccagttggaagattctcttctacaatcttaaa
ttcaacagaaatctggaggagttggacctcagtggaaatccactgagttactctgcaatt
caaagtctctgtaaggccctgagattccctggctgccatctaaagaccttgtggcttgtt
gaatgcggcctcacattcggatactgctcatacctggcctcagtactcagtgcccactcc
tgcctgactgaactgtacctgcagaaaaatgacctaagtgacagtggtgtgaggatgctg
tgtgaggggctcaggaatccagcctgcaacctcagcatcctgcggctggaccaggcctct
ctcagtgaccaagtgattgcagagctcaggagtctggaggcaaagaatccaaagctgttc
atctccatcataaggaagccacatgtgatgggccctactatgaacatggataaagaagtg
ggtgatagcccggccatactgaagcagcagagacaacaatcaggagccgaacacatggaa
cctctagggactgaagatgagttctggggacctacaggacctgtgactgctgagatggtt
gacaaagagaggaaactgtaccgagttcagttgcccatggctggttcttaccactgtccc
agcacaggactccactttgtggtgacaaaggcagtgacaatcgagattgaattctgtgcc
tggagccaattcctggacaagactcccttgcaccagagtcacatggtggctggacctctg
tttgacatcaaagctgagcaaggagctgtgactgaagtgtacctccctcattttgtgtcc
ctccaagagggagtggtggacagctctatgttccgtattgcccactttcaagaatatggg
atggtcctagaaacgccagcaagggtgaaacagcattacgcagtactggaaaacccaagc
ttctccccaatgggggttctactgagaatgattccagctgtgagacacttcatccccatc
acgtccatcacactgatctactatcacctctatctcgaggacgtcacctttcacctttac
ctggtccccaatgactgcagtattcgaaaggccattgatgaggaagaaatgaagtttcag
tttgtgcgcataaacaagccacccccagtagacgctctttatcttggttcccgctatatc
gtgtcttcctccaaattggtggaaattatcccagaggaactggagctgtgctacagaagc
cctggggaatcccagctcttctctgagatcgacgttgggcacatggattcagtgattaag
ctgcaaatcaaagacaagaggaacatgaatctcaaatgggagaccttgctgaaaccaagg
gacctcagacctgcaccgctcaggattgctccagcccccgaagatgctcctccctcacta
cacttcatggaccagcatcgggagcagctggttgcccgagtgacatcagtggactctcta
ttagacaagctgcatggtctggtgctgagtgaagattcctatgaagtagtgcgggctgag
accacaaaccaaaacaagatgaggaagctctttagcttcagcaggtcctggagctgggta
tgcaaagaccaattctaccaagctctgaaggagacccatcctcacctcgtcaaggatata
cttgagaagttaggtgggggtctctgttag
DBGET
integrated database retrieval system
