Mus pahari (shrew mouse): 110331808
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Entry
110331808 CDS
T05929
Name
(RefSeq) LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-containing protein 1b allele 1-like
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
110331808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpah04131
]
110331808
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mpah04054
]
110331808
Membrane trafficking [BR:
mpah04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
110331808
Pattern recognition receptors [BR:
mpah04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
110331808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FIIND
NACHT
UPA-FIIND
CARD
NOD2_WH
LRR_6
NLRC4_HD2
LRR_4
Motif
Other DBs
NCBI-GeneID:
110331808
NCBI-ProteinID:
XP_021068346
LinkDB
All DBs
Position
14:complement(39076161..39152823)
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AA seq
1201 aa
AA seq
DB search
MYQCLDAVKLTQMPNLIQMLKDRRKGPFQKYMRNKERLFAHIFLERNIFFQKCHKLYPRG
SENLFRKSWHPCAPETGGHMIEIXDLFRPNLDTQKETQLVIKEGAVGIGXSTLARLVKRA
XSEGQLYRDPFQHVFFSFRELAQSKQLSLAELIAQGQEVPTAPINQILPHAEYLLFILDG
IDDPAWDLEERNPELCLYWNQTQPVHTLLGSLLGKSVLPGAALLLTAWITALQKLIPSLG
QPRWIEVXGFSEFEQKNYFYKXFAEGGAAITSFSLVQSNPVLLMLCEVPWVCWLVCTCLK
KQKEQGGDLSLTSQSTTALCLKYLSLTIPGQHIRTQLRALCSLAAEGICQRRTLFSESDL
CKQGLAEDAIDTFLETSVLQKQPSSLSYSFAHLCLXEFLTVMSYILENRKKKYGDMGNDK
ILETLIEAYGIHTPCEAPIGLLNKQGMREMEKIDACKLPWKTKLKLLWSILGNPPYQLHH
LGLLHCLYENQEEVFLILVMHDFHLTIPGPNHMEATVFQTNTNLLVVQTDMELMGVTFCI
QFCYHVRSLQPKSGGQQEHEPTAPRMVLYRWTPITDASWKIFFFNLKFNPNLEKLDLSGN
PLSYSAACSLCKALRYPGCQLKTLWLVECGLTSTACSLLASVLSASSSLTELDLQLNDLG
DDGVQLLCEGLRNPACNLNILWLDQASLSEEVITELRTLEAKNLKLLISRAWKPHVTVPT
MNMDKEEVGDSPAILKQQRQQSGDKHMEPLRTENDFWGPTGPVATEVVDRERNLYRKPHV
MVPTENMDKEEVVDSSKSFKQQQQQSGGKHMEPLGTDNDFWGPTGPVAIEVVDREGNQYR
VQLPMAGSYHCPSTGLHFVVRRAVTIEIEFCAWNQYLDETFLKHSYMVVGPLFDIKVKQG
AVTAVHLPHFVALQEGSVDSSLFHVAHFQEHGMVLETPARVDQHYAVLENPSFSPMGVLL
RMIPAVGHFIPITSITLIYYQFRFGEITFHLYLVPNDCSIRKAIDEEEMMFRFVRINKPP
PVDALYIGSRYIVSGSKKVEIMPKELELCYQSPGESQLFSEIHVRHMGSGIKLQLRDKGH
MKLKWEAFLKPGDLIPALPRIASTTNDAPFLRHFVDQHREQLVARVTSVDTLLDKLHGLV
LSEDSYEAVRAETTNQDKMRKLFSLSRSWSQACKDQFYQALKETHPHLMMDLLVNSGRVA
L
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgtaccaatgcctggatgctgtaaagcttacacagatgcctaacttgattcagatgttg
aaggatcgaagaaagggaccattccagaaatatatgagaaacaaggagagactatttgcc
cacatattccttgaaagaaacatattttttcaaaaatgtcacaaattgtacccaagaggc
tcagagaacttgttcaggaaaagctggcatccatgtgcaccagaaacaggaggacatatg
attgagatctaagacttatttcgccccaacttagatacccagaaagagactcagttggtc
ataaaagagggagctgttgggattgggnaatcaacactggccaggttggtgaagagagcc
tagagtgaaggccagctttacagggatcccttccaacatgtcttcttcagcttcagagag
ctggcccagagcaagcagctgagtctggctgagctcatagcacaaggccaggaagtgccc
acagctcccataaatcagatcctgcctcatgccgagtatttgctcttcatcctggatggc
atagatgacccagcatgggacttggaggagcggaatcctgagctatgtctgtactggaac
cagacacagcctgtgcacactctgctgggcagtttgctggggaaatccgtccttcctggg
gctgctttgctactcacagcttggatcacagctctacagaagcttattccttcattgggg
cagccacgctggatagaagtcnctgggttctctgagtttgaacagaaaaactatttctac
aaataatttgcagaaggaggagctgcaattacatcatttagtttagttcagtcaaaccca
gtgctcctgatgctgtgtgaggttccctgggtgtgctggttggtctgcacttgcctgaaa
aagcagaaggagcagggtggagacctttcactgacctcacagtccaccacagccctctgc
ctgaaatacctttccctgacaatcccaggtcagcacataaggacccaactcagagccctc
tgttcattggctgctgaggggatctgccaaagaaggaccctgttcagtgagagcgacctc
tgtaagcaagggttagcagaggatgccattgacactttcctggagaccagtgtccttcaa
aagcagcccagctctctgagctacagctttgcccatttgtgtctctaggagttcttgaca
gtgatgtcctacatcttggagaataggaagaaaaaatatggtgatatgggaaatgacaaa
attttggaaacactgatagaagcttatggaattcataccccgtgtgaggcacccattggt
cttttgaataaacagggaatgagagaaatggaaaagatcgatgcctgcaagctgccttgg
aagacaaagttgaagctgctatggagcatcctagggaacccaccctatcaactacatcat
ctgggtttgctccactgtctgtatgagaatcaggaagaggtgttcctgatactggtgatg
catgattttcacttaacaatacctggcccaaaccacatggaagccacagtgttccagaca
aacacgaatctcctggtggtacagacagacatggagctcatgggggtcactttctgcatt
cagttctgctatcatgtgaggagccttcaaccgaaaagtggtgggcagcaggaacatgag
ccgacagcccccaggatggttctgtacaggtggaccccaatcactgatgccagttggaag
attttcttcttcaatctaaaattcaaccccaacctggagaagctggacctaagtggaaat
ccactgagctactctgcagcatgcagtctttgcaaggccctgagataccctggctgccaa
ctaaagaccttgtggcttgttgaatgtggcctcacatccacagcctgctcactcctggcc
tcagtgctcagtgccagctccagcctgactgagctggacctgcagctgaatgacctgggt
gatgatggtgtgcagctgctgtgtgaggggctcaggaatcctgcctgcaacctcaacatc
ctgtggctggaccaggcctctctcagtgaagaagtgattacagagctcaggaccctggag
gcaaagaatctgaagttgctcatctccagagcatggaagccacatgtgactgtccctact
atgaacatggataaagaagaagtgggtgatagcccggccatactgaagcagcagagacaa
cagtcaggagacaaacacatggaacctctgagaactgaaaatgacttctggggccctaca
ggacctgtggctactgaggtggttgacagagagaggaacctgtaccggaagccacatgtg
atggtccctactgagaacatggataaagaagaagtggttgatagttcaaagtcattcaaa
cagcagcaacaacaatcaggaggcaaacacatggaacctctgggaactgacaatgacttc
tggggccctacaggacctgtggctattgaggtggttgacagagaggggaaccagtacaga
gttcaattgcccatggctggttcctaccactgtcccagcacaggactccactttgtggtg
agaagggcagtgacaatcgagattgaattctgtgcctggaaccaatacctggacgagact
ttcttaaagcacagttacatggtggttggtcctctgtttgacatcaaagttaagcaagga
gctgtaactgctgtgcacctccctcattttgtggctctccaagagggaagtgtggacagc
tccttgttccatgttgcccactttcaagaacatgggatggtcctagaaacacccgcaagg
gtagatcaacattacgcagtactggaaaacccaagcttctctccaatgggggttctactg
agaatgattccagctgttggacacttcatccccatcacttccataacactgatctactat
caattccgttttggggaaatcacctttcacctttacctggtccccaatgactgcagtatt
cggaaggccattgatgaggaagaaatgatgtttcggtttgtgagaataaacaagccaccc
ccagtagatgctctttatattggttcccgctatatcgtgtctggctccaaaaaggtggaa
attatgccaaaggaactggagctgtgctaccaaagccctggggaatcccagcttttttct
gagatccacgttagacacatgggttcagggattaagctacaactcagagacaaggggcat
atgaaactcaaatgggaggccttcctgaaaccaggagacctcatacctgctctgcctagg
attgcttcaaccaccaatgatgctcctttcttacgacattttgtggaccagcatcgggag
cagctggtggcccgagtgacatctgtggacacactcttggacaagctgcatggtctggtg
ctgagtgaagattcctatgaggcagtgcgggctgagaccacaaaccaagacaagatgagg
aagctcttcagccttagccggtcctggagtcaagcctgcaaagaccaattctaccaagct
ctgaaggagacccatcctcacctgatgatggacctccttgtgaactctggcagggtcgct
ttgtga
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integrated database retrieval system
