KEGG   Mus pahari (shrew mouse): 110334948
Entry
110334948         CDS       T05929                                 
Name
(RefSeq) DNA dC->dU-editing enzyme APOBEC-3-like isoform X1
  KO
K18750  C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah03250  Viral life cycle - HIV-1
mpah05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    110334948
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    110334948
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mpah03019]
    110334948
Messenger RNA biogenesis [BR:mpah03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     110334948
SSDB
Motif
Pfam: NAD2 APOBEC2 NAD1 APOBEC_N SNAD4 APOBEC3 APOBEC_C APOBEC4_like APOBEC4 APOBEC1 dCMP_cyt_deam_1 MafB19-deam Hairy_orange
Other DBs
NCBI-GeneID: 110334948
NCBI-ProteinID: XP_021072665
Ensembl: MGP_PahariEiJ_G0020031
LinkDB
Position
17:45005476..45018494
AA seq 432 aa
MGPVCLGCSHRRRYSPIRNLISREKFDFHFKNLCYAKDRKDTFLCYEVTRKDCDSPNSLC
HGVFKNKGNTHAEICFLYWFHDKVLKVLSLREEFKVTWYMSWSPCFECAEQVARFLATHH
NLSLAIFSSRLYNIRDPKTGQGLCRLVQEGAQVAAMGLPEFEKCWKKFVDNDGQPFMPWK
RLCTNFRYQNSKLQEILRPCFILGPSSSSPTLSDVCLTKGVPGMRFWVECSQMSLLREEV
FYLQFHNSRKVQPVQHRCYYRRKPYLCYRLEQSNGQELLKGWLLSKKGKQHAEILFLEKI
RSMELSQMRITCYLTWSPCPNCAWQLAAFQKDRPDLILHIYTSRLYFHWRRIFQKGLCSL
WRSGIQVDVMDLPQFTDCWTNFVNPQRPFRPWKGLEKNSRHTQRRLRRIKESWGLQDLVN
DFENLQLGPPMS
NT seq 1299 nt   +upstreamnt  +downstreamnt
atgggaccagtctgtctgggatgcagccatcgcagacgctattcaccgatcagaaacctg
atatctcgagaaaaattcgacttccactttaagaacctatgctatgccaaagaccggaaa
gataccttcttgtgctatgaagtgactagaaaggactgcgattcacccaactccctttgc
catggggtctttaagaacaagggcaacacccacgctgaaatctgctttttatactggttc
catgacaaagtactaaaagtgctgtctctgagggaagagttcaaggtcacctggtacatg
tcctggagcccctgcttcgaatgcgcagagcaggtagccaggttcctggccacacaccac
aacctgagcctggccatcttcagctcccgcctctacaacataagggacccgaagaccggg
cagggactttgcaggctggttcaggaaggagcccaggtggctgccatgggcctacccgaa
tttgaaaagtgttggaagaagtttgtggacaatgacggccagccattcatgccttggaag
agactgtgtacaaattttagataccagaattctaagcttcaggagattctgagaccttgc
ttcatcctgggcccttccagctcttcacccactctgtcagatgtctgtctaacaaaaggt
gtcccagggatgaggttctgggtggaatgcagccaaatgagcctgctaagagaagaggtg
ttttatttacaatttcacaacagccgaaaggtccagccagtccagcatcgctgctactac
cgcaggaagccctatctatgctaccggctggagcagtccaatggccaagagctgctcaaa
ggctggctgctaagcaagaaaggaaaacaacatgcagaaatcctcttcctggagaagatt
cggtccatggagctgagtcaaatgagaatcacctgctacctcacttggagcccctgccca
aactgtgcctggcaactggcggcattccaaaaggatcgcccagatctaattctgcacatc
tacacttcccgcctgtatttccactggaggaggatcttccagaaggggctgtgttctctg
tggcgatcagggattcaggtggacgtcatggacctcccacagtttactgactgctggaca
aactttgtgaacccgcaaaggccgtttaggccatggaagggactggagaaaaacagcagg
cacacacaaaggcggctccgcaggatcaaggagtcctggggcctgcaagatttggtgaat
gactttgaaaacctacagcttggacccccgatgtcttga

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