Mus pahari (shrew mouse): 110338760
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Entry
110338760 CDS
T05929
Symbol
C22H9orf72
Name
(RefSeq) guanine nucleotide exchange C9orf72 homolog isoform X1
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04140
Autophagy - animal
mpah05014
Amyotrophic lateral sclerosis
mpah05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110338760 (C22H9orf72)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
110338760 (C22H9orf72)
05022 Pathways of neurodegeneration - multiple diseases
110338760 (C22H9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpah04131
]
110338760 (C22H9orf72)
Membrane trafficking [BR:
mpah04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
110338760 (C22H9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
110338760
NCBI-ProteinID:
XP_021077846
Ensembl:
MGP_PahariEiJ_G0024012
LinkDB
All DBs
Position
22:complement(41669340..41700826)
Genome browser
AA seq
481 aa
AA seq
DB search
MSTICPPPSPAVAKTEIALSGESPLLAATFAYWDNILGPRVRHIWAPKTDQVLLSDGEIT
FLANHTLNGEILRNAESGAIDVKFFVLSEKGVIIVSLIFDGNWNGDRSTYGLSIILPQTE
LSFYLPLHRVCVDRLTHIIRKGRIWMHKERQENVQKIVLEGTERMEDQGQSIIPMLTGEV
VPVMELLASMKSHSVPEDIDIADTVLNDDDIGDSCHEGFLLNAISSHLQTCGCSVVVGSS
AEKVNKIVRTLCLFLTPAERKCSRLCEAESSFKYESGLFVQGLLKDATGSFVLPFRQVMY
APYPTTHIDVDVNTVKQMPPCHEHIYNQRRYMRSELTAFWRATSEEDMAQDTIIYTDESF
TPDLNIFQDVLHRDTLVKAFLDQVFHLKPGLSLRSTFLAQFLLILHRKALTLIKYIEDDT
QKGKKPFKSLRNLKIDLDLTAEGDLNIIMALAEKIKPGLHSFIFGRPFYTSVQERDVLMT
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactatctgccccccaccatctcctgctgttgccaagacagagattgctttaagt
ggtgaatcacccttgttggcggctacctttgcttactgggataatattcttggtcctaga
gtaagacacatttgggctccaaagacagaccaagtacttctcagtgatggagaaataact
tttcttgccaaccacactctaaatggagaaattcttcgaaatgcagagagtggggctata
gatgtaaagttttttgtcttatctgaaaagggggtaattattgtttcattaatcttcgac
ggaaactggaacggagatcggagcacttacggactatcaattatactgccgcagacggag
ctgagtttctacctcccacttcacagagtgtgtgttgacaggctaacacacataattcga
aaaggaaggatatggatgcataaggaaagacaagaaaatgtccagaaaattgtcttagaa
ggcacagagaggatggaagatcagggtcagagtatcattcctatgcttactggggaagtt
gttcctgtaatggagctgcttgcatctatgaaatcacacagtgttcctgaggacattgat
atagctgatacagtgctcaatgatgatgacattggtgacagctgtcacgaaggctttctt
ctcaatgccatcagctcacatctgcagacctgtggctgttctgtcgtagtgggcagcagt
gcagagaaagtaaataagatagtaagaacactgtgcctttttctgacaccagcagagagg
aaatgctccaggctatgtgaagcagaatcgtcctttaagtacgaatcgggactctttgta
caaggcttgctgaaggatgcaacgggcagttttgttctacccttccggcaagttatgtat
gccccgtaccccaccacgcacattgatgtggatgtcaacactgtcaagcagatgccaccg
tgtcatgaacatatttataatcaacgcagatacatgaggtcagagctgacagccttctgg
agggcaacttcagaagaggacatggctcaggacaccatcatctacacagatgagagcttc
actcctgatttgaatattttccaagatgtcttacacagagacactctagtgaaagccttc
ctggatcaggtcttccatttgaagcctggcctgtctctcaggagtactttcctcgcgcag
ttcctcctcattcttcacagaaaagccttgacactaatcaaatacatagaggatgacacg
cagaaggggaaaaagccctttaagtctcttcggaacctgaagatagatcttgatttaaca
gcagagggcgatcttaacataataatggctctagctgagaaaattaagccaggcctacac
tctttcatctttgggagacctttctacactagtgtacaagaacgtgatgttctaatgacc
ttttga
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