Mus pahari (shrew mouse): 110339077
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Entry
110339077 CDS
T05929
Symbol
Plod3
Name
(RefSeq) procollagen-lysine,2-oxoglutarate 5-dioxygenase 3
KO
K13646
lysyl hydroxylase/galactosyltransferase/glucosyltransferase [EC:
1.14.11.4
2.4.1.50
2.4.1.66
]
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah00310
Lysine degradation
mpah00514
Other types of O-glycan biosynthesis
mpah01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
110339077 (Plod3)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
110339077 (Plod3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
mpah01003
]
110339077 (Plod3)
Enzymes [BR:
mpah01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.4 procollagen-lysine 5-dioxygenase
110339077 (Plod3)
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
110339077 (Plod3)
2.4.1.66 procollagen glucosyltransferase
110339077 (Plod3)
Glycosyltransferases [BR:
mpah01003
]
O-Glycan biosynthesis
O-linked Gal type
110339077 (Plod3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2OG-FeII_Oxy
2OG-FeII_Oxy_3
Glyco_tranf_2_3
Motif
Other DBs
NCBI-GeneID:
110339077
NCBI-ProteinID:
XP_021078211
Ensembl:
MGP_PahariEiJ_G0024447
LinkDB
All DBs
Position
23:27167755..27176937
Genome browser
AA seq
742 aa
AA seq
DB search
MAAAGPEPRLWLLLLLLLLPPLPPVTSASDRPRGANAVNPDKLLVITVATAETEGYRRFL
QSAEFFNYTVRTLGLGQEWRGGDVARTVGGGQKVRWLKKEMEKYADQEDMIIMFVDSYDV
ILASSPTELLKKFVQSGSHLLFSAESFCWPEWGLAEQYPEVGTGKRFLNSGGFIGFAPTI
HQIVRQWKYKDDDDDQLFYTRLYLDPGLREKLKLSLDHKSRIFQNLNGALDEVVLKFDQN
RVRIRNVAYDTLPVVVHGNGPTKLQLNYLGNYVPNGWTPKGGCGFCNQNLRTLPGGQPPP
RVLLAVFVEQPTPFLPRFLQRLLLLDYPPDRISLFLHNSEVYHEPHVADAWPQLQDHFSA
VKLVGPEEALSAGEARDMAMDSCRQNPECEFYFSLDADAVLTNPETLRVLIEQNRKVIAP
MLSRHGKLWSNFWGALSPDEYYARSEDYVELVQRKRVGVWNVPYISQAYVIRGETLRTEL
PQKEVFSSSDTDPDMAFCKSVRDKGIFLHLSNQQEFGRLLATSRYDTDHLHPDLWQIFDN
PVDWREQYIHENYSRALDGEGLVEQPCPDVYWFPLLTEQMCDELVEEMEHYGQWSGGRHE
DSRLAGGYENVPTVDIHMKQVGYEDQWLQLLRTYVGPMTEYLFPGYHTKTRAVMNFVVRY
RPDEQPSLRPHHDSSTFTLNVALNHKGVDYEGGGCRFLRYDCRISSPRKGWALLHPGRLT
HYHEGLPTTRGTRYIMVSFVDP
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggcaggcccggaaccccggctttggctcctgctcctgctgctgctgctgccg
ccgctgccccccgtaacttctgcctccgatcgaccccggggcgccaatgctgtcaaccca
gacaaattgctggtgatcactgtggctacggcagagacggaggggtaccggcgttttctg
cagtccgcggagttctttaactacactgtacggaccctgggcctgggacaggagtggcga
gggggtgatgtcgctcgaacagtcggtggaggccagaaggtcaggtggctcaagaaggaa
atggagaaatatgcagatcaggaagacatgatcatcatgtttgtggacagctacgacgtg
attctggcaagcagcccaacagagctgctgaagaagtttgttcagagtggcagtcatctg
ctgttctctgcggagagcttctgctggcctgagtgggggctggcggagcagtaccctgag
gtgggcacggggaagcgcttcctcaactctggtggattcattggcttcgctcccaccatc
catcagattgtccgccagtggaaatacaaagacgacgacgatgatcagttgttctacact
cgactgtacctggacccagggctgcgggagaaactcaaactcagtctggaccataaatcc
cggatctttcagaacctcaatggagccttagacgaagtggtcttaaagttcgaccagaat
cgtgtgcgcatccggaacgtggcctacgacacgcttcccgttgtggtccatgggaatggt
cccactaagctccagctcaactacctggggaactacgtgcccaatggctggactcccaaa
ggaggctgtggattctgcaaccagaacctgaggacactcccgggggggcagcctcccccc
cgggtgcttctggccgtgtttgtggagcagccaactcccttcctgcctcggttcctgcag
cgcctactgctcctggattacccccccgacaggatctctctcttccttcacaacagtgag
gtgtaccatgagcctcatgttgcagatgcctggccacagctccaggaccacttctcagcg
gtaaagctagtggggccagaggaggccctgagcgcaggggaggccagggacatggccatg
gacagctgtcggcagaaccctgagtgtgagttctactttagcctggatgctgatgccgtc
cttacgaacccggagaccttgcgtgtcttgattgaacaaaacaggaaggtaatagctccc
atgctttcccgccatggcaagctctggtccaacttctggggtgccctgagccccgatgag
tactacgcccgctccgaagactacgtggaactggtgcagcggaagcgagtgggcgtgtgg
aatgtaccctacatatcccaggcatatgtgatccgtggggagaccctgaggactgagctg
ccccaaaaggaggtattctccagcagcgacacagacccagatatggctttctgcaagagc
gtccgggacaagggcatcttcctccacctcagcaaccagcaggagtttggccggctgctg
gctacttctcgctatgacacagaccacctgcacccagacctctggcagatctttgacaac
cctgtggactggagagaacagtacattcatgagaattacagccgggccctggatggggaa
gggctggtggaacagccatgcccagatgtgtactggttcccactgctgaccgagcagatg
tgtgatgagctggtggaggaaatggaacactatggccagtggtctggaggccggcacgag
gattccaggttggctggaggatacgagaatgttcccaccgttgatatccacatgaaacag
gtgggatatgaggaccagtggcttcagctgctgaggacatatgtggggcccatgacggag
tacctgttccctggctaccacaccaagacacgggctgtgatgaacttcgtggtccgctac
cggccagacgagcagccctcacttcggccacaccatgactcgtccaccttcactctcaat
gtcgccctcaaccacaagggcgtggattatgagggaggcggctgccgcttcctgcgttac
gactgcagaatctcatctccgagaaaaggctgggctctcctgcaccctggccgccttaca
cactaccatgaggggctgcccaccacccgggggactcgatacatcatggtgtcctttgtt
gacccctga
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