Methyloradius palustris: ZMTM_08360
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Entry
ZMTM_08360 CDS
T07445
Symbol
cefD
Name
(GenBank) isopenicillin-N epimerase
KO
K04127
isopenicillin-N epimerase [EC:
5.1.1.17
]
Organism
mpau
Methyloradius palustris
Pathway
mpau01100
Metabolic pathways
mpau01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
mpau00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00311 Penicillin and cephalosporin biosynthesis
ZMTM_08360 (cefD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01008 Polyketide biosynthesis proteins [BR:
mpau01008
]
ZMTM_08360 (cefD)
Enzymes [BR:
mpau01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.17 isopenicillin-N epimerase
ZMTM_08360 (cefD)
Polyketide biosynthesis proteins [BR:
mpau01008
]
Nonribosomal peptide tailoring proteins
Others
ZMTM_08360 (cefD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Cys_Met_Meta_PP
Aminotran_1_2
DegT_DnrJ_EryC1
Tom5
Motif
Other DBs
NCBI-ProteinID:
BCM24577
UniProt:
A0A8D5G7H9
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All DBs
Position
895999..897177
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AA seq
392 aa
AA seq
DB search
MQSKWNHQSEFNAGLEMRKHWMLDDEISFLNHGSFGATPKVVLQSQQDYRALMERQPVDF
FVRQLPDLIRKAAADLAGFLGANPDDLAFVENATAGINAVLRSFPWRAGDELLLANHAYP
AVKNAAYFVARQFGITVREFEVPFPLEDENEILQAFTKAISPNTRMAVLDHVSSPLAIIY
PLEKMLVICRAHSVKTLVDGAHAPGMLPLNLDAIDADWYVGNCHKWLFAAKGCAFLWAAP
HARDFLQPMSISLHADVGFPQSFDWVGTRDVSAWLSISAAIDFYKSVGGDEIPEKLHNFA
IVMAQQLAADWHVDLPAKPAMFGSMVTLPMPFNGEATQETADQWRDTLWHENRIEVPFFA
INRQLWLRISAQLYNSSIDYEQLSQAVTRKFL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcaaaatggaatcatcaatcagagtttaatgcgggcttggaaatgcgcaagcac
tggatgctagatgatgagatttcttttctgaatcatggctcatttggcgcaaccccgaaa
gttgtattacagagtcagcaagattaccgcgccctgatggaacgtcagcctgtcgatttt
tttgtcaggcaactgccagatttaattaggaaggcagccgctgatttagcgggttttctg
ggggctaatcctgatgatttagcctttgtcgagaatgctacagcaggcattaacgcagtg
ttacgttcttttccatggcgggcaggtgatgagctattgctagccaatcatgcgtatcct
gcagtaaaaaatgcggcttattttgttgctcgtcaatttggaattactgtgcgggaattt
gaagtgccatttccgctagaagatgaaaacgaaatactgcaggcattcacgaaagcaatt
agccccaataccagaatggccgtgcttgaccatgtttcatcgcctctcgccattatttac
cccttagagaaaatgctggtaatttgtcgtgcacatagtgtgaagactttagtggatggg
gcgcacgcaccaggaatgttgccgcttaaccttgatgcaatagatgctgattggtatgtg
ggtaattgccataaatggttattcgctgccaagggctgtgcattcttatgggcagcgcca
catgcgcgcgattttttgcagccaatgtctatttctctgcatgcggatgttggctttcct
caaagctttgattgggttggcacgcgagatgtcagcgcatggctttcaattagtgctgcg
atagatttttataaaagtgtaggtggtgatgaaataccagagaaacttcacaattttgcg
attgtaatggcgcagcaacttgcggcagattggcatgtcgatttgccagcaaagcctgcg
atgtttggcagtatggtaactttgcctatgccgtttaatggtgaggctacccaagaaaca
gcggatcaatggcgagatacgctctggcatgaaaacagaattgaagtgccattttttgcg
atcaatagacagttatggctacgtatttcagcgcagctttataatagtagtattgattat
gaacagttgtcacaagctgttacccgcaaatttttgtga
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