Mycoplasmoides pneumoniae M129-B7: C985_0362
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Entry
C985_0362 CDS
T02596
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mpb
Mycoplasmoides pneumoniae M129-B7
Pathway
mpb03030
DNA replication
mpb03410
Base excision repair
mpb03420
Nucleotide excision repair
mpb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C985_0362
03410 Base excision repair
C985_0362
03420 Nucleotide excision repair
C985_0362
03430 Mismatch repair
C985_0362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpb03032
]
C985_0362
03400 DNA repair and recombination proteins [BR:
mpb03400
]
C985_0362
Enzymes [BR:
mpb01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
C985_0362
DNA replication proteins [BR:
mpb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
C985_0362
DNA repair and recombination proteins [BR:
mpb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
C985_0362
NER (nucleotide excision repair)
GGR (global genome repair) factors
C985_0362
MMR (mismatch excision repair)
DNA ligase
C985_0362
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
C985_0362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
DNA_ligase_ZBD
BRCT
Nlig-Ia
HHH_5
HHH
Auto_anti-p27
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
AGC04273
LinkDB
All DBs
Position
complement(425597..427573)
Genome browser
AA seq
658 aa
AA seq
DB search
MAKVAQIRAIVEQLKRYDYHYYVLDDPLVSDFEYDQLYKQLQALEQAHPELIQPDSPTQR
VGGIVVEAFNKFPHQNPMLSLDNAFDTATIASFIANINNLTGVQNRFVVEPKIDGVSISL
TYENGLLTRALTRGDGLVGEDVLSNVKTIKSIPLTIPFHKQVEIRGEIFVDKKTFAQINE
NLAKPFANARNLAAGTLRNLNSEVSAKRKLKAFFYFVPNALTLGCRSQSAVLAQLKQWNF
PVSKAVASFDRPEALIEYLEQFDQTRDQLNFQVDGLVVKLDNFHFYDQLGFTSKFPRWAL
AYKFKPKFVQTKLRGVLVTVGRTGKINYTAQLDPVNLEGTVVSAATLHNFDYIKEKDIRL
NDTVIIYKAGEIIPKVLEVCLPLRTAANQPIPEQTHCPACQAPLVQYKDEVDQYCTNERC
DQRNLEAINYFVSKTAMDIQGLSIQTISKLYENNLVRSVVDLYHLKEHKAAVLALELKIG
EVLFNKLISSIEQSKTKGMARLLTGLGIKHVGQVLAKSLTKHFENIDALQSASMETLLEL
PDVGPTVAESLFNWFHNDNNLQLLAALKAVGVQMDALKSNTNFDTASIYFQKSFVITGSF
PISRDTIKNLLVNKYDCRFTNNVTSKVDFVLAGIKATPRKLEQAKALNIPIINEPIWT
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggtcgcacaaattcgagcaatagttgaacagttaaaacgctatgattaccat
tactatgttttggacgatccgctggtcagtgactttgaatacgaccagttatacaaacag
ctgcaagcgttggaacaagcccatcctgagttaatccaacccgattcaccaacccaacgt
gttgggggaattgtagtggaagcatttaataagtttcctcaccaaaatccaatgctttcc
ctagacaatgccttcgacacagcaacaattgctagttttattgccaacattaacaactta
actggagtgcaaaaccgctttgtggtggaacccaaaattgatggtgtaagcatctcttta
acttacgaaaacggattgttaactcgggctttaacccgcggtgatggacttgtgggtgag
gatgttttgagtaatgttaaaacgattaagagcattcccctaacgattccctttcacaaa
caggtggaaatccgcggtgagatctttgtcgataaaaaaacatttgcgcaaattaacgag
aatttagcaaaaccgtttgccaatgcccgcaatttagcagcaggtacactacggaacctc
aacagtgaggtgagtgccaagcgcaaacttaaggccttcttttactttgttcccaacgcc
ttaactttgggttgtaggagtcaaagtgccgtgttagcacagttaaagcagtgaaacttt
ccagtgtccaaagcggtggctagctttgatcgacccgaagcattaattgaatacctcgag
cagtttgaccaaacacgtgatcagttgaacttccaagtcgatggcctagtggttaaacta
gataactttcacttttacgaccagttagggtttactagtaagtttccccgttgggcgttg
gcgtacaagtttaaaccgaagtttgtccaaaccaaactgcgtggtgtcttggtaacagtg
ggacgcactggcaagattaactataccgcgcagttagatccagttaacttagaggggaca
gtagtatcagcagccacactgcataactttgactacattaaggagaaggacattcgttta
aacgatacagtgataatttacaaagcgggggaaattatccctaaggtattggaggtgtgt
ttaccgttaagaacagcagcgaatcaaccgattcccgaacaaacccactgtccggcatgt
caagccccgttagtgcagtataaggatgaggtagatcagtactgtaccaatgaacgttgt
gaccagcgtaaccttgaagcgattaattactttgtgtccaaaacggctatggacatccag
gggctaagtatccagaccattagtaagctgtatgaaaataacttagtgcgcagcgtcgtt
gatttataccacttaaaggagcacaaagccgcggtgttagccttggaacttaaaattggt
gaagtgctgttcaataaactaatcagcagcatcgaacagtccaaaaccaaggggatggca
cgcttgttaactgggcttggcattaaacatgtggggcaagtgttagccaaaagcttaacg
aagcactttgaaaacatcgatgccttacaatccgccagtatggaaacactgttagaactc
cctgatgtgggaccgactgtggcagaatcgttgtttaactggtttcacaatgacaataac
ttacagctgttagctgcacttaaagcagttggagtgcaaatggatgctttaaagagcaac
actaactttgacaccgcgagcatttactttcaaaagagttttgttattactggcagcttt
ccaattagtcgcgataccattaaaaacttgctcgtcaataagtatgattgtcgttttaca
aataacgtcactagtaaagttgattttgtgttagctggcattaaggctacacctcgtaaa
cttgaacaagctaaagccctcaatattcccattattaatgaaccaatttgaacctaa
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