Malacoplasma penetrans: MYPE1840
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Entry
MYPE1840 CDS
T00107
Symbol
MYPE1840
Name
(GenBank) NAD-dependent DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mpe
Malacoplasma penetrans
Pathway
mpe03030
DNA replication
mpe03410
Base excision repair
mpe03420
Nucleotide excision repair
mpe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mpe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MYPE1840 (MYPE1840)
03410 Base excision repair
MYPE1840 (MYPE1840)
03420 Nucleotide excision repair
MYPE1840 (MYPE1840)
03430 Mismatch repair
MYPE1840 (MYPE1840)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpe03032
]
MYPE1840 (MYPE1840)
03400 DNA repair and recombination proteins [BR:
mpe03400
]
MYPE1840 (MYPE1840)
Enzymes [BR:
mpe01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MYPE1840 (MYPE1840)
DNA replication proteins [BR:
mpe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MYPE1840 (MYPE1840)
DNA repair and recombination proteins [BR:
mpe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MYPE1840 (MYPE1840)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MYPE1840 (MYPE1840)
MMR (mismatch excision repair)
DNA ligase
MYPE1840 (MYPE1840)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MYPE1840 (MYPE1840)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
Nlig-Ia
SpoOE-like
Motif
Other DBs
NCBI-ProteinID:
BAC43975
NIH_Japan:
1840
UniProt:
Q8EWL9
LinkDB
All DBs
Position
231463..233568
Genome browser
AA seq
701 aa
AA seq
DB search
MFVILHNKLIIYYLDMSNNKEILNRIQNLRKNLNQYNYEYYGLENPSVSDYEYDMCLKEL
IQLETQYPEFDSPNSPSKKVGGYISEKFNKVKHEIPMMSLSNAFDEEDLLKFDNDIKKAI
GSSDFSYVVEPKIDGLSISVKYKDGNLIQAVTRGDGEIGEDVTQNIKTIKSLPLNIEYDK
DLEIRGEVFLTKKDFEKINSDPNLTKKFANARNAASGSLRNLDSNITAKRNLSALFYYVP
KATELKIAKQYDVLSWLDKQLIPISREIRHCNNIQGVIERISELTDTRDQFKYDIDGIVI
KVNDFNHYEEIGYTSKFPKWAIAYKFPAVVKQTKLNSIDVTVGRTGRINYIANLDEILLE
GSQVKKATLHNYDYIKDHEIMLNDIVEIYKAGEIIPKIIRSIKEKRDGSQVVFPEPTNCP
SCDSKLVKKEQEVDLYCLNENCVEKQIQQIEYFSSRDAMNIEGLSISIISQLFRNKIIND
AIDLYELAHKKEILIATKQKFYRKNDDGTKTEFERSLFKDKSFTNIIEAIEKSKSNSMEK
FLTGLGIKYVGLRAAKALSKRFKSIEELAMATREEIEQVPDTGEKMSESLVNWFSDPKNQ
DLLWRAKKVGINFNYINEFNDVVVKNEHQKYMNKTFVITGSFNKSRNEIKNYIESVFNAK
VSDSVSKKTDYLVVGENAGDSKLKKANDLKIEIITEPFWDN
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
ttgtttgtaattttacacaataagttgataatatattatcttgatatgagtaataataaa
gagatattaaatagaattcaaaacttaagaaaaaacttaaaccaatacaattatgaatat
tatggtttagaaaatccatctgtaagtgattatgaatacgatatgtgtttaaaggagtta
attcagttagaaacacaatatccagaatttgattcaccaaattcaccttctaaaaaagtt
ggtggatatatttctgaaaaatttaataaagtaaaacatgagattccaatgatgtcatta
tctaatgcctttgatgaagaagatttgcttaaatttgataatgatattaaaaaagctatt
ggatcatcagattttagttatgttgtagaacctaaaattgatggattaagtatttcggtt
aaatataaagatggtaatttaattcaagcagttactagaggtgatggcgaaattggagaa
gatgttactcaaaacattaaaacaataaaatcacttcctttgaatattgagtatgataaa
gatttagaaattagaggagaagtttttttaactaaaaaagattttgaaaaaataaatagt
gatccaaatctaactaaaaaatttgctaatgctagaaatgcagcatctggatctttaaga
aacctagattcaaatattactgctaaaagaaatttaagtgcacttttttattatgttcca
aaagcaactgaattaaaaattgctaagcaatatgatgtattaagttgattggataaacaa
ctaattccaatctctagagagataagacactgtaataatattcaaggagtaattgaaaga
atttcagaacttacagatactagagatcaatttaaatatgatattgatggaattgttatt
aaagtaaatgactttaatcactatgaagaaataggttatacttctaaattccccaaatga
gcaattgcttataaatttcctgcagttgttaaacaaactaaacttaattctattgatgta
acagtcggtagaactggaagaattaactatattgcaaatttagatgaaattttattagaa
ggatctcaagttaaaaaagccactcttcataactatgactatattaaagatcatgaaatt
atgcttaatgatattgtagagatctataaagctggtgaaattattcctaagattattaga
tcaattaaagaaaaaagagatggttcacaagtggtttttcctgaacctacaaattgtcca
agttgtgattcaaaactagttaaaaaagaacaagaagttgatttatattgtttgaatgaa
aattgtgttgaaaaacaaattcaacaaattgaatacttctcatcaagagatgctatgaat
attgaaggattatctatctctatcattagtcaactatttagaaacaaaattattaatgat
gcaattgatttatatgagcttgcacataaaaaagaaattttaattgccactaaacaaaag
ttttatagaaaaaatgatgatggtacaaaaacagaatttgaaagatctttatttaaagat
aaatcatttactaacatcattgaagctattgaaaaatctaaaagtaattctatggaaaaa
ttcttaactggattaggaattaagtatgttggtttaagagcagctaaagctttatctaaa
agatttaaatctattgaagaattagcaatggctacaagagaagaaattgaacaagttcca
gatactggtgaaaaaatgagtgaatcattggttaactgattttctgatcctaagaatcaa
gatttattatgaagagctaaaaaagtaggaattaactttaactatataaatgagtttaat
gatgttgttgtaaaaaatgaacatcaaaaatatatgaataaaacatttgtaattacaggt
tcatttaataaatctagaaatgaaattaaaaactatattgaaagtgtttttaatgcaaaa
gtttcagatagtgtttctaaaaaaacagactatttagtagttggtgaaaatgcaggtgat
tcaaaactaaaaaaagcaaatgatttaaaaattgaaatcattactgaaccattttgagac
aattaa
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