Mannheimia pernigra 17CN0883: HV560_09125
Help
Entry
HV560_09125 CDS
T07233
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
mpeg
Mannheimia pernigra 17CN0883
Brite
KEGG Orthology (KO) [BR:
mpeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mpeg03009
]
HV560_09125 (rlmC)
Enzymes [BR:
mpeg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
HV560_09125 (rlmC)
Ribosome biogenesis [BR:
mpeg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HV560_09125 (rlmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_12
Methyltransf_32
Cons_hypoth95
Ubie_methyltran
Motif
Other DBs
NCBI-ProteinID:
QLB42959
LinkDB
All DBs
Position
1897926..1899104
Genome browser
AA seq
392 aa
AA seq
DB search
MPNLANCPHFKRGDCTSCQWLEKPYQSQLADKEADLKRLISPFILQNKTEILPLVASPIS
HFRNKAKMVVSGSVERPILGILKDQHDPQSGVDLTDCLLYPASFYSLFPILKDFIARAGL
VPYNIKKKKGELKYILITESQYNQSLMLRFVVRSESKRALVERELPHLLEKLPPNSVVSL
NIQPQHAAVLEGETEIFLTERKVIEENFNSVPLFIRPQGFFQTNPTVASQLYLTAQQWVE
NLPIKKCWDLFCGVGGFGLHCTKALQKKGIDVELTGIEISASAIESATKSAATLALERVR
FISLDSAKFALNENGTPPDLVIVNPPRRGIGQSLAEFLNNLGSTYLIYSSCNAQSMAKDF
ESLTHYELCKVQLFDMFAHTSHYETLTLLIKK
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgcctaatctagctaactgcccacattttaaacgtggtgattgcacctcctgccaatgg
cttgaaaaaccataccagagccaattagccgataaagaagccgacctcaaacggttaatt
tctccatttattttgcaaaataaaacggaaatcttaccgcttgtagcatcccccatttca
cattttcgcaataaagcgaaaatggtggtttcaggtagtgtggaacgcccaattttaggc
attttaaaagatcaacacgacccgcaaagtggggtagatttaaccgactgcctactttac
ccagcttctttttatagcttattccccattcttaaagattttattgcccgagcaggcctt
gtgccctacaacatcaaaaagaaaaaaggcgagctgaaatatatcctaatcactgaaagc
caatataaccaatcgttaatgctccgttttgtggtgcgaagcgaatcaaagcgagcattg
gtggagcgagaattaccccatctgttagaaaaattgccacctaattcggtggtgagccta
aatattcaaccgcaacacgccgctgttttagaaggtgaaacggagattttcttaaccgaa
cgaaaagtgatcgaggaaaatttcaatagcgtaccgctatttattcgcccacaaggcttt
ttccaaacaaatccaactgtagccagccagctttacttgacagctcaacaatgggttgaa
aatttaccaataaaaaagtgttgggatctgttttgtggcgtaggcggttttggtttacat
tgtacaaaagcattacaaaaaaaagggattgatgttgaattaactggcattgaaatttca
gcatccgcaattgaaagtgccacaaaatcagcggcaacattagccttagaaagagtaaga
tttatctcgctcgattctgcaaaatttgccttaaatgaaaacggcacaccacctgatttg
gtgattgtaaatccacctcgtagaggcattggtcaatctttagcggaatttttaaacaat
ttgggctcaacttatttaatctattccagctgcaatgcccaatctatggcaaaagatttt
gaatccttaactcattacgaattatgcaaagtgcagttatttgatatgtttgcacatact
tcacactatgaaacgctgacgctgttaatcaaaaaataa
DBGET
integrated database retrieval system
