Methylophaga pinxianii: LGT42_001535
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Entry
LGT42_001535 CDS
T08312
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
mpin
Methylophaga pinxianii
Pathway
mpin01501
beta-Lactam resistance
mpin01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
mpin00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LGT42_001535
01503 Cationic antimicrobial peptide (CAMP) resistance
LGT42_001535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mpin03036
]
LGT42_001535
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mpin02000
]
LGT42_001535
01504 Antimicrobial resistance genes [BR:
mpin01504
]
LGT42_001535
Chromosome and associated proteins [BR:
mpin03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LGT42_001535
Transporters [BR:
mpin02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LGT42_001535
Antimicrobial resistance genes [BR:
mpin01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LGT42_001535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
UPH45989
LinkDB
All DBs
Position
complement(311806..312888)
Genome browser
AA seq
360 aa
AA seq
DB search
MLKSFFLNKLLAGSLVFFLFNQACLAATPVSVSKPIVAESTETLTLSGSLTAERRALLSP
RVDGLVKEVLVDAGYRVKQGDILLRQDPAIATQQLEQAKAATSEAQASANEAERLVKEAK
RLRGDNYISATELANRESNFALSQAALAAARAMQNTAAEQLRRHELPAPFSGVISAKMTE
AGEWVNRGDQVLELVALDPVRLDVNVPQERFAEITTESRVEILPDALPSRKLSGKITALV
PVSDAQARSFLVRILVDAEDVNLLPGTSASAVIYITGEQDKGYRIPRDAVLRHPDGGRSV
FIVDDQNKAQRRSVTVGSESSEGIIITQGLTADDLVVIRGNEVLQDNDEVEINNDDTKRN
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaatcatttttcttaaataagctgctcgcgggcagtttggtcttttttttgttc
aatcaagcctgtctggcagcgactcccgttagtgtcagcaaaccaatcgtagcagagtcc
acagaaacactaacgctatccggctctttaaccgcagagcgtcgggctctgctttcaccc
cgtgtggatggtttggtcaaagaagttctggttgatgccggctaccgggttaaacaaggc
gacatattactgagacaggatccggccatcgctacacaacaactggaacaggccaaagct
gctaccagtgaagcccaagccagcgctaatgaggcagaacgcctggtaaaggaagccaaa
cgtctacgcggggataattatatttctgctaccgaactcgccaatcgtgaatctaacttt
gccttgagccaggctgcactggctgctgccagagccatgcaaaatactgcggcagaacag
ctcagacgccatgaattgccggcccctttcagtggcgttatcagcgcaaaaatgactgaa
gcaggtgaatgggtaaaccggggtgatcaagtacttgaacttgttgcactcgatccggtc
aggctggatgtgaatgtgccacaggaacgctttgcagaaattactactgaaagccgcgtt
gaaattcttcctgatgccctgccttcacgaaaactttccggaaaaattaccgctctggtg
ccggtgagcgatgctcaagcccgatcttttctggtccgtattcttgttgatgccgaagat
gtgaatcttttacctggaacttcagccagtgccgttatttatatcactggtgaacaagac
aaaggctatcgtatcccccgtgatgccgtattgagacatcctgatggtggacgcagtgtg
tttattgtcgatgatcagaataaagcccaacgtcgcagtgtcacggtgggaagtgaaagt
tctgaaggcatcattatcacccagggcttaacagcagacgacctggtggtcattcgtggc
aacgaggtgttacaggataacgatgaagtcgagataaacaacgacgatacaaaaaggaat
taa
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