Methylophaga pinxianii: LGT42_006450
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Entry
LGT42_006450 CDS
T08312
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
mpin
Methylophaga pinxianii
Pathway
mpin03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mpin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LGT42_006450 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpin03400
]
LGT42_006450 (nth)
Enzymes [BR:
mpin01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LGT42_006450 (nth)
DNA repair and recombination proteins [BR:
mpin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LGT42_006450 (nth)
Prokaryotic type
LGT42_006450 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
Ogg-HhH
Motif
Other DBs
NCBI-ProteinID:
UPH46922
LinkDB
All DBs
Position
complement(1326850..1327500)
Genome browser
AA seq
216 aa
AA seq
DB search
MNQTQRQQFFSRLRDQNPSPTTELNYRTPFELLIAVILSAQATDVGVNKATDKLYPVANT
PQAILDLCLDGLKSYIKTIGLFNSKAENVIKTCQQLIDKHGGEVPDDREALEALPGVGRK
TANVILNTVFKHPVMAVDTHIFRLSNRTGLAKGKNVREVEDRLMKVIPDEFKLDAHHWLI
LHGRYVCTARKPHCDQCIVADLCDEYRRNHRQRTTA
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaacgcagcggcaacaatttttcagcagactgcgcgatcaaaacccatcgccg
acgaccgagctgaactacaggacgccgtttgaattactcattgcagtgatcctgtcagct
caggcaacggatgtaggcgtcaataaggccactgataaactgtatcccgtggctaacact
ccccaggccattctggatctgtgtctggatggtttgaaaagctatatcaaaaccatcggc
ttgtttaacagcaaagctgaaaacgtgatcaaaacctgccagcagttaatcgataaacat
ggtggcgaagtccccgatgatcgtgaagcactggaagccttgcccggtgtcggccgtaaa
accgctaatgtcattctcaataccgtattcaaacatccggtgatggcagtcgatacacat
atttttcgtttgtcgaatcgaactggtctggcaaaaggcaaaaatgtccgggaggtcgaa
gaccgcctgatgaaagtaatccccgatgaattcaaactggatgcccatcactggctgatc
cttcatggccgttatgtctgcaccgccagaaaacctcattgtgaccaatgtatagtcgca
gatctgtgtgatgaataccggcgcaatcatcgacaacggaccacggcctga
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