Microcystis panniformis: VL20_1875
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Entry
VL20_1875 CDS
T04037
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mpk
Microcystis panniformis
Pathway
mpk03030
DNA replication
mpk03410
Base excision repair
mpk03420
Nucleotide excision repair
mpk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mpk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VL20_1875
03410 Base excision repair
VL20_1875
03420 Nucleotide excision repair
VL20_1875
03430 Mismatch repair
VL20_1875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpk03032
]
VL20_1875
03400 DNA repair and recombination proteins [BR:
mpk03400
]
VL20_1875
Enzymes [BR:
mpk01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
VL20_1875
DNA replication proteins [BR:
mpk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
VL20_1875
DNA repair and recombination proteins [BR:
mpk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
VL20_1875
NER (nucleotide excision repair)
GGR (global genome repair) factors
VL20_1875
MMR (mismatch excision repair)
DNA ligase
VL20_1875
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
VL20_1875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
DNA_ligase_ZBD
Nlig-Ia
PTCB-BRCT
BRCT_2
HHH
TnpV
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AKV67006
UniProt:
A0A0K1RZ60
LinkDB
All DBs
Position
complement(1573942..1575960)
Genome browser
AA seq
672 aa
AA seq
DB search
MTIPLEIQQRCQQLKTELQRASYAYYVLDDPFIPDSVYDQLYRELEDLEKRYPQLITPDS
PTQRVGDKISSQFVSVRHNIPLYSLENAFNLEELNKWGNRWQRYVNETQDTEYVCELKID
GSALALTYENGFLVRGVTRGDGVTGEDITPNVRTIRSIPLRLNIDNPPAIVEVRGEAFLP
LDTFDKINQEREEKRESLFANPRNAAAGTLRQLDPKIVDKRRLQFFAYTLHLDDNHITTQ
WQSLDRLETLGFLVNPHRQLCPSLQQVAQYYQDWQEKRHQLAYMTDGVVVKINDLQRQNR
LGFTQKFPRWAIALKYPAEEVPTVVKDIIVNVGRTGAVTPMAVMEPVQVAGTTVQRATLH
NSDRVAELDIRIGDTVIIRKAGEIIPEVVRILPELRPPQTLPFQMPTNCPECQSPLVRPV
GEAVTRCVNSSCPAILRGSVVHWASRDALDIRGLGEKVVILLIEQGLVTTISDLYSLEKT
EIAKLDRMGDKSALNLITAMAQSKNQSWSRVLYGLGIRYVGSVNAKILAESFRTVEELAN
ASVTDLASVYGIGEEIAQSVYDWFKIAANRDLVAKLQAAGLQFAAAAKTTTTKATLAGKT
FVITGTLPTLKREEAKELIEKAGGKVTGSVSKKTDYLVLGEAAGSKLEKALELGITQLTE
AQLLELVEVGKV
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgactatccccttagaaatccaacaacgttgccaacaactaaaaacagaactacaaaga
gccagttatgcttattatgttcttgatgatccttttatacccgatagcgtttatgatcaa
ctttatcgggaattagaagacctagaaaagcgttatccccaattaatcacccccgatagt
cccacccaaagagtcggagataaaatctctagtcaatttgtttctgttcgtcataatatt
cccctgtatagtctcgaaaatgcctttaacctcgaagaattaaataaatggggcaaccgt
tggcaaagatatgtaaatgaaacccaagacacggaatatgtgtgtgaattaaaaatcgat
ggttccgcgttagctttaacctacgaaaacggctttttagtcagaggtgttaccagaggg
gatggagtcactggcgaagatattacccccaatgtgcggacaattcgctctattccttta
cgcttaaatatagacaatcccccggcaattgtggaagtgcgcggcgaagcttttttaccc
ctcgatacctttgataaaatcaatcaagaaagagaagaaaaaagggaatctctctttgct
aatccccgcaatgcagcagccggaaccctacgacaattagatccgaaaatagttgataaa
agacgcttacaattttttgcctataccctgcatttagacgataaccatatcactactcaa
tggcaatccttagatagattagaaaccctgggatttctggttaatccccaccgtcaactc
tgtccatccctgcaacaagtggcacaatactatcaagattggcaagaaaaacgtcatcaa
ttagcctacatgaccgatggtgtcgtagtcaaaatcaacgatttacagcgacaaaatcgg
ttaggattcacccaaaaattcccccggtgggccatcgctttaaaatatcctgccgaagaa
gtccccacagtagttaaagatattatcgtcaatgtgggacgcaccggcgcggttacaccc
atggcggtgatggaaccggtacaggtagcaggaaccaccgtacaaagggctactttacat
aatagcgatcgagtggccgaattagatatccgcatcggtgacacggtaattatccgcaaa
gcgggggaaattatcccagaagtggtgagaatcctgcccgaattgcgtcctccccagact
ttacccttccagatgcccactaattgccctgaatgtcaatctcccctagtccgtccggtg
ggggaagcggtgacgcgctgtgtcaatagttcctgtccggcgattttgcggggaagtgta
gtacattgggccagtcgcgatgctctcgatattcggggattaggggaaaaagtggtgatt
ttgctgattgaacagggattagttaccaccatttctgacctctacagcctcgaaaaaacg
gaaattgccaaattagaccgaatgggcgataaatcagccttaaatttgattacagctatg
gctcagagcaaaaatcaaagctggtcgagggtactttatgggctagggattcgctatgtg
ggcagcgttaacgccaaaattctcgcggaaagttttcggactgtggaggagttagctaac
gccagcgtgactgatttagcttctgtctatggtatcggtgaagaaatcgctcaatcggtc
tatgattggtttaaaatcgccgctaatcgggatttagtcgctaaattacaagcggctggt
ttacaatttgccgcagcagcaaaaaccaccaccacgaaagcgactttagcagggaaaacc
tttgtgattactggcactttaccaactctcaaacgggaggaagcgaaagaattaatcgaa
aaagccggggggaaagtgacgggttctgtgagcaaaaaaaccgattatttagtgctagga
gaagcggcgggttctaagctagaaaaagccctagaattgggcattactcagctaaccgaa
gcacaattactcgaattagtcgaagtcggaaaagtctag
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