Pseudoduganella plicata: E1742_21000
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Entry
E1742_21000 CDS
T06563
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
mpli
Pseudoduganella plicata
Pathway
mpli00300
Lysine biosynthesis
mpli00550
Peptidoglycan biosynthesis
mpli01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mpli00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
E1742_21000
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
E1742_21000
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mpli01011
]
E1742_21000
Enzymes [BR:
mpli01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
E1742_21000
Peptidoglycan biosynthesis and degradation proteins [BR:
mpli01011
]
Precursor biosynthesis
Amino acid ligase
E1742_21000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
QBQ38373
UniProt:
A0A4P7BJ73
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All DBs
Position
4730786..4732336
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AA seq
516 aa
AA seq
DB search
MSDMKNNNDISNWIRQAAPTGQLASDSRRIRTGDVFFAYSADPSNDGAGDGRAFIDAAVK
QGAAAVVYDPAGFDWKPEWTVASLAVPDLKRRAGPIAHAFYDMPDAGMFTVGVTGTNGKT
SSAVWLGHALARGGDTAAVIGTLGVALFQGRTEPEFDATGYTTPDQVLLARTLADCRAAG
AAALAIEVSSIGLEQGRADGMHFDVALFTNLTRDHLDFHGTMEAYEAAKRRLFDWPGLKT
AVVNLDDPAGLRLAQHVLAQGKAAVTGYTLKDAATQPDIAGVNLLRASQVRTRSAGTEFM
LESPLGGAHVKTQLVGSFNVSNALGVLGALLAKGLTLRAAVEAIEALTPAPGRMQLVGGN
DAPMVVIDYAHTPDALEKTVEVLRSVAQDRNGQLWCVFGCGGDRDPGKRPQMGRIAQAAD
HVLVTSDNPRSEDPHTIIAQIVAGMDKSLPAKVQAIEDRAAAILSAIKHAARNDVILVAG
KGHEPYQEIKGKKLPFSDADHAQLALSARLTMMRPN
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacatgaagaacaacaacgatatcagcaactggatcagacaggccgcgcccacg
gggcagctggcttccgactcgcgccgcatcaggacgggcgacgtattttttgcgtattca
gccgacccttcgaatgacggcgcaggcgatggccgcgcgttcatcgacgcagccgtgaag
cagggcgccgcggcggtcgtctacgaccccgccggcttcgactggaagcccgaatggacg
gtggccagcctggccgtaccggacctgaaacgccgcgccggacccatcgcgcatgcgttt
tacgacatgcccgatgcaggcatgtttaccgtgggcgtgacgggtacgaacggcaagacc
tccagcgccgtctggctgggacacgcgctggcccgcggcggcgacaccgccgccgtcatc
ggcacgctcggcgtggcgttgttccagggccgcaccgaaccggagttcgatgccaccggc
tataccacgccggaccaggtgctgctggcccgcaccctggccgactgccgcgccgccggc
gccgccgcgctggcgatcgaggtgtcgtcgatcggcctggaacagggccgtgccgacggc
atgcatttcgacgtggcgctgtttaccaacctcacgcgcgaccatctggacttccacgga
acgatggaagcgtatgaagccgccaagcgccgcctgttcgactggcccggcctgaaaacg
gctgtggtcaacctggacgatccggccggactgcgcctggcgcagcacgtgctggcccag
ggcaaggccgcggtaacgggctacaccttgaaagacgcggcaacgcagccggacattgcc
ggcgtcaacctgctgcgcgcaagccaggtgcgcacgcgcagcgccggcacggaattcatg
ctggagtcgccgcttggcggcgcgcacgtcaagacgcagctggtcggttcgttcaacgtc
agcaatgcgcttggcgttctcggcgcgctgctggcgaaaggcctgacgctgcgcgcggcc
gtggaagccatcgaggcgctgacgccggcgccgggccgcatgcagctcgtcggcggcaac
gatgcgccgatggtcgttatcgactacgcccacacgcccgatgcgctggaaaaaaccgtc
gaggtgctgcgcagcgtggcgcaggaccgcaacggccagctgtggtgcgtgttcggctgc
ggcggcgaccgcgatccgggcaagcgcccgcagatgggccgcatcgcgcaggcggcggat
cacgtgctcgtcaccagcgacaacccgcgcagcgaagacccgcacacgatcatcgcccag
atcgtcgccggcatggacaagagcctgcccgccaaggtacaggccatcgaggaccgcgcg
gcggccattctgtcggccatcaagcacgctgcaaggaacgacgtgatcctcgtggccggc
aaggggcacgaaccgtaccaggaaatcaagggcaagaagctgccgttctcggacgccgac
catgcccagctggcgctgtccgcccgcctgacgatgatgaggccgaactga
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