Pseudoduganella plicata: E1742_21755
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Entry
E1742_21755 CDS
T06563
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
mpli
Pseudoduganella plicata
Pathway
mpli03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mpli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E1742_21755 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpli03400
]
E1742_21755 (nth)
Enzymes [BR:
mpli01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
E1742_21755 (nth)
DNA repair and recombination proteins [BR:
mpli03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
E1742_21755 (nth)
Prokaryotic type
E1742_21755 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QBQ38510
LinkDB
All DBs
Position
complement(4909962..4910609)
Genome browser
AA seq
215 aa
AA seq
DB search
MNAAKRHEIFRRLREANPHPTTELEYTTPFELLIAVLLSAQATDVGVNKATRKLYPVANT
PQKILDLGLDELTTYIQTIGLYKTKGKNVMATCRILVDQYGGEVPHDRAALESLPGVGRK
TANVVLNTAFGDPTIAVDTHIFRVSNRTGIAPGKNVDIVEQKLLKFVPKEFLQDAHHWLI
LHGRYTCIARKPQCWNCMIADLCEYKAKTPAPSVV
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcagccaaacgtcacgagatctttcgccgcctgcgcgaagccaacccccacccg
accacggaactggaatacacgacgccgttcgaactgctgatcgccgtgctgctctcggcg
caggcgacggacgtgggcgtcaacaaggccacgcgcaagctgtatccggtggcgaatacg
ccacagaagatcctggacctggggctggacgaactgacgacctacatccagaccatcggc
ctgtacaagaccaagggcaagaacgtgatggcgacctgccggatcctcgtcgaccagtac
ggcggcgaagtgccacacgaccgcgcggcgctggagtcgctgccgggcgtgggccgcaag
acggccaacgtcgtgctcaacacggccttcggcgacccgacgattgccgtcgacacgcac
atcttccgcgtgtcgaaccgcaccgggattgcaccaggaaagaacgtcgacatcgtcgag
caaaagctgctcaagttcgtgccgaaggaattcctgcaggacgcccatcactggctgatc
ctgcacggccgctacacctgcatcgcccgcaagccgcaatgctggaactgcatgatcgcc
gacctgtgcgagtacaaggccaaaacgccggcgccttcggtggtatag
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