Mycolicibacterium poriferae: MPOR_24450
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Entry
MPOR_24450 CDS
T07158
Symbol
ligA
Name
(GenBank) DNA ligase A
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mpof
Mycolicibacterium poriferae
Pathway
mpof03030
DNA replication
mpof03410
Base excision repair
mpof03420
Nucleotide excision repair
mpof03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mpof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MPOR_24450 (ligA)
03410 Base excision repair
MPOR_24450 (ligA)
03420 Nucleotide excision repair
MPOR_24450 (ligA)
03430 Mismatch repair
MPOR_24450 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpof03032
]
MPOR_24450 (ligA)
03400 DNA repair and recombination proteins [BR:
mpof03400
]
MPOR_24450 (ligA)
Enzymes [BR:
mpof01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MPOR_24450 (ligA)
DNA replication proteins [BR:
mpof03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MPOR_24450 (ligA)
DNA repair and recombination proteins [BR:
mpof03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MPOR_24450 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MPOR_24450 (ligA)
MMR (mismatch excision repair)
DNA ligase
MPOR_24450 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MPOR_24450 (ligA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
HHH
BRCT_2
X92_N
Motif
Other DBs
NCBI-ProteinID:
BBX51419
UniProt:
A0A6N4VAG9
LinkDB
All DBs
Position
2555389..2557530
Genome browser
AA seq
713 aa
AA seq
DB search
MSPKASQDPEAALAEQADGAVDAVDADLRRQWQELAEEVRGHQFRYYVRDAPIISDAEFD
TLLRELEALENAHPQLRTPDSPTQLVGGAGFATDFTSADHLERMLSLDNVFTPDELGAWA
ARIKSEIGDGAHYLCELKIDGVALALVYRDGRLVRAATRGDGRTGEDVTLNARTIDDVPE
TLTGTEEFPIPRVLEVRGEVFFRVADFEELNAGLVADGKPPFANPRNSAAGSLRQKNPAV
TARRKLRMICHGLGHLEGPAGFSFASLHDAYRALGQWGLPVSTHTAQVQGLEAVTERIAY
WGEHRHDVDHEIDGVVVKVDEVALQRRLGSTSRAPRWAVAYKYPPEEATTKLLDVRVNVG
RTGRVTPFAYMEPVKVAGSTVGLATLHNASEVKRKGVLIGDTVVIRKAGDVIPEVLGPVV
DLRDGSEREFVMPTHCPECGTELAPAKEGDADIRCPNSRSCPAQLRERVFHVAGRGAFDI
EGLGYEAATALLQAGVITDEGDLFGLTADDLLRTELFTTKAGELSANGKRLLAHLGQAKA
QPLWRVLVALSIRHVGPTAARALATEFGSLEAIESASEEQLADTEGVGPTIAAAVIDWFT
VDWHRAIVEKWRAAGVRMADERDASIERTLEGLTVVVTGSLTGFSRDGAKEAIITRGGKA
SGSVSKKTDYVVAGDSPGSKYDKAIELGVPVLDEDGFSRLLEQGPEGVQPARP
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
gtgagtccgaaggcgagtcaggatcccgaggccgcgctggccgagcaggccgacggcgcg
gtcgacgccgtcgacgccgacctgcgccggcagtggcaggaactcgccgaggaagtgcgc
ggccaccagttccgctactacgtacgcgacgcgccgatcatctccgatgccgagttcgac
acgttgctgcgcgagctcgaggccctcgagaacgcccacccgcagttgcggacgcccgat
tcgcccacccagctcgtcggcggcgccgggttcgccaccgacttcacctccgccgaccat
ctcgagcggatgctgagtctggacaacgtcttcacccccgacgagctcggtgcgtgggcc
gcccgcatcaaaagcgaaatcggagacggcgcgcattacctgtgcgagctgaagatcgac
ggcgtggcgctggcgctggtctaccgcgacggacgattggtccgcgccgcgacccgcggt
gacggccgcaccggcgaggatgtcaccctcaacgcccgcaccatcgacgacgtgccggag
acactcaccggcacagaggaattcccgattccgcgggtactggaggtccgcggcgaggtg
ttcttccgggtggccgatttcgaggaactcaacgcagggctggtcgccgacggcaagccg
cccttcgcgaacccgcgcaacagtgccgcgggttcgctgcggcagaagaatccggcggtc
acggcgcggcgcaagctgcgcatgatctgccacggacttggtcacctggaaggtcctgcg
ggcttctcctttgcctcactgcacgacgcctaccgggcgctggggcagtggggcctgccg
gtctcgacccacaccgcacaggttcagggtctggaggcagtgaccgaacgcatcgcctac
tggggtgagcaccgccacgacgtcgatcacgagatcgacggggtggtggtcaaggtcgac
gaggtggcgctgcagcgccggctcgggtcgacctcgcgcgctccgcgctgggcggtcgcc
tacaagtacccacccgaggaggcgaccaccaaactcctcgacgtccgtgtcaacgtcggc
cggaccggccgggtcacgccgttcgcctacatggaaccggtcaaggtggcggggtccacc
gtcgggctggccacgctgcacaacgcctcggaggtcaagcgcaagggcgtgctcatcggc
gacaccgtggtcatccgcaaggccggcgacgtcatccccgaggtgctcggcccggtcgtg
gacctgcgcgacgggtccgagcgcgagttcgtcatgcccacccactgtccggagtgcgga
accgaactcgctccggccaaagagggtgacgccgacattcgctgccccaactcacgctcg
tgcccggcacagttgcgggagagggtgtttcacgtcgccgggcgtggcgcgttcgacatc
gagggcctgggttacgaggctgcgaccgctctgctgcaggccggcgtcatcaccgacgag
ggcgacctgttcggcctcaccgccgacgatctgctgcgcaccgagctgttcaccaccaag
gccggcgaattgtcggccaatggcaagcgcctgctggcccacctcggccaggcgaaggcg
caaccgctgtggcgggtgttggtggcgctgtcgatccgccatgtcgggccgaccgcggct
cgtgcactggccaccgaattcggcagcctcgaggccatcgagtccgcctccgaggagcag
ctggccgacaccgagggcgtgggcccgaccatcgcggcggcggtgatcgactggttcacc
gtggactggcaccgcgcgattgtcgagaagtggcgcgcggccggtgtgcggatggccgat
gaacgagacgccagcatcgagcgcacgctggaagggttgaccgtggtggtgaccgggtcg
ctgaccgggttctcccgcgacggcgccaaggaagcgatcatcacccggggcggtaaggcg
tccggctcggtgtcgaagaagaccgactacgtcgtcgccggggattcgccgggatccaag
tacgacaaggcgatcgagctcggggtgccggtgctcgacgaggacggcttcagccgattg
ctcgagcagggcccggagggggtccagccggcccggccgtga
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