Methylocapsa polymorpha: RZS28_05895
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Entry
RZS28_05895 CDS
T11074
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
mpol Methylocapsa polymorpha
Pathway
mpol03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mpol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RZS28_05895 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpol03400
]
RZS28_05895 (nth)
Enzymes [BR:
mpol01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
RZS28_05895 (nth)
DNA repair and recombination proteins [BR:
mpol03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RZS28_05895 (nth)
Prokaryotic type
RZS28_05895 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
WOJ90815
UniProt:
A0ABZ0HVH4
LinkDB
All DBs
Position
1254934..1255722
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AA seq
262 aa
AA seq
DB search
MTKINPPKEKPAPKASARRLAPIEAGSKPAAKLGAKGQGKGLAKPSHARATPPDPARVKE
IFRRFEAANPHPKGELHYKNAFTLLVAVVLSAQATDAGVNKATPALFALADSPQKMLALG
EEKVREMIKTIGLYRTKAKHVIMLSERLVKEFGGEVPQSREALETLPGVGRKTANVVMNI
AFGAPTMAVDTHIFRISNRIPLAPGKTPLEVERGLEKIIPDAYKLHAHHWLILHGRYICM
ARAPKCPVCIISDLCQWPDKRA
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaaataaacccgccaaaagagaaacccgcgccgaaggcctccgcccgccggctc
gcgccgatcgaggccggttccaagcccgccgccaagctcggcgctaaaggtcaaggcaag
ggcttggcaaagccaagccacgcgcgcgcgacgccgcccgaccccgcgcgcgtaaaagag
attttccgccgtttcgaagccgccaacccgcatccgaaaggcgagctccactataagaac
gccttcacccttctcgtcgccgtggtgctctcggcgcaggccaccgacgccggcgtcaat
aaggcgacgcccgcgcttttcgccttagccgacagcccgcaaaaaatgctggcgctcggc
gaggagaaggtgcgcgagatgatcaagacgatcggcctctaccggaccaaggcgaagcat
gtgatcatgctgtcggagcggctggtgaaggagttcggcggcgaggttccgcaaagccgc
gaggcgctcgaaacgcttccaggcgtcggccgcaagaccgccaatgtggtcatgaacatc
gcctttggcgcgccgaccatggcggttgacacccatattttccgcatctccaaccgcatt
cccttggcgcccggcaagacgccgctcgaagtcgagcgcgggttggagaagatcatcccc
gacgcctacaagctgcatgcgcatcattggctgatccttcacggccgctatatttgcatg
gcccgcgcgccgaaatgccccgtgtgcatcatatcggatctgtgccaatggccggataag
cgggcgtag
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