Micromonas pusilla: MICPUCDRAFT_17567
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Entry
MICPUCDRAFT_17567 CDS
T02696
Name
(RefSeq) uncharacterized protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
mpp
Micromonas pusilla
Pathway
mpp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MICPUCDRAFT_17567
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpp03019
]
MICPUCDRAFT_17567
Messenger RNA biogenesis [BR:
mpp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
MICPUCDRAFT_17567
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
H2TH_5
AAA_23
nSTAND3
TsaE
AAA_25
AAA_28
SRP54
ORC-CDC6-like
AAA_15
PduV-EutP
AAA_22
Arf
Motif
Other DBs
NCBI-GeneID:
9684573
NCBI-ProteinID:
XP_003059413
JGI:
17567
UniProt:
C1MU08
LinkDB
All DBs
Position
Unknown
AA seq
379 aa
AA seq
DB search
METAGPFAALAAQQKRAKTTEDDDASAAAECDVSIAPAVANAAAKPSSPLPSASPASTAP
GAAPRWGVAVNDLDWSYPGIDGQPVAGQPPLIKNFNLKLAPGSCCLLLGANGAGKTTLLK
ILGGKHMVPKEKVLIHGREAFYDTGLTTSGQLSYIGGDWQRDVAFAGYGVTLAGDFPASK
MLNSIPGVDEARRKKIIEVLDIDPTWRMHQVSDGQRRRVQLAYGLMIPYSVLLLDEITVD
LDVLGRADLMAFLRQECMERSVTIVYATHIFDGLEQFASHVAFVAGGELRFCEPIEKIDG
LRDLEPGALLSTVEGWLRKEAEIKREALAKKGIVPKKVFEYVRNSGWGSGRTASTVSFGP
ELGMKHEGIKGSSNAVMRG
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgcgggcccgttcgccgcgctcgccgcgcagcagaagagggcgaagacgacc
gaggacgacgacgcgtccgccgccgcggagtgcgacgtctccatcgcgcccgcggtcgcg
aacgccgcggcgaagccgtcgtcgccgctcccgagcgcgtcccccgcgtccacggccccg
ggcgcggcgccgcggtggggcgtcgcggtgaacgacctcgactggtcctaccccggcatc
gacggccagcccgtcgcggggcaaccgccgctcatcaaaaacttcaacctgaagctcgcg
cccgggtcgtgctgcctcctcctcggcgcgaacggcgcggggaagacgacgctgctgaag
attctcggcgggaagcacatggtcccgaaggagaaagtcttgatccacggcagggaggcg
ttctacgacaccggactcacgacgagcggccaactgagttacatcggcggcgactggcag
cgagacgtcgccttcgccgggtacggcgtcaccctcgcgggcgatttccccgcgtcgaag
atgctcaactccatcccgggcgtggacgaggcgcggcggaagaaaatcatcgaggtgctg
gacatcgatccgacgtggcggatgcatcaagtgtcggacggccagcggcgtcgcgtccag
ctggcgtacgggctcatgattccgtactcggtgctgctcctcgacgagatcaccgtggat
ctggacgtcctggggcgcgcggatctgatggcgttcctgaggcaggagtgcatggagagg
agcgtcacgatcgtgtacgcgacgcacatattcgacgggttggagcagttcgcgagtcac
gtcgcgttcgtcgccggcggggagttgcgattttgtgagccgatcgagaagatcgacggg
ctcagagacctcgagcccggggcgttgctctcgaccgtggaggggtggctgcgcaaagag
gcggagatcaaacgagaggcgctcgcgaagaaggggatcgtcccgaagaaggtgttcgag
tacgtgcgaaacagcggctgggggagcggacgaaccgcgtccacggtgtcgttcggaccg
gagctggggatgaagcacgaggggattaaagggtcgtcgaacgcggtcatgcgcgggtga
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