KEGG   Micromonas pusilla: MICPUCDRAFT_25062
Entry
MICPUCDRAFT_25062 CDS       T02696                                 
Name
(RefSeq) uncharacterized protein
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
mpp  Micromonas pusilla
Pathway
mpp03420  Nucleotide excision repair
mpp04120  Ubiquitin mediated proteolysis
mpp04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:mpp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    MICPUCDRAFT_25062
   04120 Ubiquitin mediated proteolysis
    MICPUCDRAFT_25062
  09124 Replication and repair
   03420 Nucleotide excision repair
    MICPUCDRAFT_25062
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mpp04121]
    MICPUCDRAFT_25062
   03400 DNA repair and recombination proteins [BR:mpp03400]
    MICPUCDRAFT_25062
Enzymes [BR:mpp01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     MICPUCDRAFT_25062
Ubiquitin system [BR:mpp04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   MICPUCDRAFT_25062
  Multi subunit type E3
   SCF complex
    Ring finger protein
     MICPUCDRAFT_25062
   Cul2 complex
     MICPUCDRAFT_25062
   Cul3 complex
     MICPUCDRAFT_25062
   Cul4 complex
     MICPUCDRAFT_25062
   Cul7 complex
     MICPUCDRAFT_25062
   Cul8 complex
     MICPUCDRAFT_25062
   Cul9 complex
     MICPUCDRAFT_25062
DNA repair and recombination proteins [BR:mpp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      MICPUCDRAFT_25062
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      MICPUCDRAFT_25062
SSDB
Motif
Pfam: zf-rbx1 zf-RING_2 zf-C3HC4_2 zf-ANAPC11 zf-C3HC4 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf-RING_16 zf-C3HC4_4 zf-RING-like PHD_NSD zf-Nse zf-RING_11 Prok-RING_4 zf-RING_10 zf-RING_6 Rtf2 zinc_ribbon_16 GBBH-like_N zf-RING_Vps41 TerY_C zf_RING_Vps8 Zf_2nd_IFT121 zf-C3H2C3 RINGv
Other DBs
NCBI-GeneID: 9681998
NCBI-ProteinID: XP_003056486
JGI: 25062
UniProt: C1ML27
LinkDB
Position
Unknown
AA seq 105 aa
MEKLSSRTRFEVKKWNAVAVWSWSICTDTCAICRNSLHEPSIEYQANPSSASEEGLSIAW
GNCGHVFHLDCISKWLRTRSNCPLCNKEWEFAKIEKIQLPVMGLE
NT seq 318 nt   +upstreamnt  +downstreamnt
atggagaaattgtcgtcgagaacacgatttgaagttaaaaagtggaatgctgtagcagtt
tggtcatggtctatatgcacggacacgtgtgccatttgccgcaatagtttgcatgagcca
agcatcgagtatcaagcaaacccctcttcggcatcagaagagggtcttagtattgcttgg
gggaattgtggccatgtgtttcaccttgattgcatttccaagtggctcaggactcgcagt
aactgtcccctatgtaacaaagaatgggaatttgccaagatagagaagatacagcttcct
gtgatgggtcttgaatag

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