KEGG   Micromonas pusilla: MICPUCDRAFT_53542
Entry
MICPUCDRAFT_53542 CDS       T02696                                 
Name
(RefSeq) uncharacterized protein
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
mpp  Micromonas pusilla
Pathway
mpp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mpp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MICPUCDRAFT_53542
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mpp03019]
    MICPUCDRAFT_53542
   03041 Spliceosome [BR:mpp03041]
    MICPUCDRAFT_53542
   03032 DNA replication proteins [BR:mpp03032]
    MICPUCDRAFT_53542
Messenger RNA biogenesis [BR:mpp03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     MICPUCDRAFT_53542
Spliceosome [BR:mpp03041]
 Complex A
  U1 snRNP components
   Sm proteins
    MICPUCDRAFT_53542
  U2 snRNP components
    MICPUCDRAFT_53542
 Complex B
  U1 snRNP components
    MICPUCDRAFT_53542
  U4/U6.U5 tri-snRNP components
    MICPUCDRAFT_53542
 Complex C
  U2 snRNP components
    MICPUCDRAFT_53542
DNA replication proteins [BR:mpp03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     MICPUCDRAFT_53542
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 9689107
NCBI-ProteinID: XP_003063833
JGI: 53542
UniProt: C1N737
LinkDB
Position
Unknown
AA seq 204 aa
MVVSRTSKMLAYINYRMRVTIVDGRQIVGRFMAFDRHMNIVLGDAEEFRKLPPKKGLTEE
ERQVRRVLGFLLLRGEEVVSLTVEGPPPQEDKRAQAQQAPPGVGIGKAAGRGMPGVVPGT
VPGAPPPGLAGPVRGVGGAMGAHMMPQFSAPPMAGGMPPGMPPPGFRPGMPPPGMPPPGF
RPGMPPPGMPPPGFRPGPPGPPPP
NT seq 615 nt   +upstreamnt  +downstreamnt
atggtcgtctcccgcacgtccaagatgctcgcgtacatcaactaccgaatgcgcgtcacg
atcgtggacgggcgccagatcgtgggacggttcatggcgttcgatcgccacatgaacatc
gtgctcggcgacgcggaggagttcagaaagctcccgccgaagaaggggctcacggaggag
gagcgccaagtccgccgcgtcctcggattcttgctcctgcgcggcgaggaggtggtctcc
ctcacggtggaggggccgcccccgcaggaggacaagcgcgcgcaggcgcagcaggcgccc
ccgggcgtggggatcgggaaggccgcgggccgggggatgccgggggtcgtcccggggacg
gtcccgggcgcgcccccgccggggctcgcggggccggtgcgcggcgtcggcggcgcgatg
ggcgcgcacatgatgccgcaattctcggctcccccgatggctggcgggatgcccccgggc
atgccgccgcccgggttcagaccggggatgccgccgccggggatgccgcctcccgggttc
cggccggggatgccgccgccggggatgccgccgccggggttcaggccggggccgccgggg
ccgccgccgccgtga

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