Micromonas pusilla: MICPUCDRAFT_56233
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Entry
MICPUCDRAFT_56233 CDS
T02696
Name
(RefSeq) WD40 repeat protein
KO
K10260
F-box and WD-40 domain protein 7
Organism
mpp
Micromonas pusilla
Pathway
mpp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mpp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
MICPUCDRAFT_56233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpp04131
]
MICPUCDRAFT_56233
04121 Ubiquitin system [BR:
mpp04121
]
MICPUCDRAFT_56233
Membrane trafficking [BR:
mpp04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
MICPUCDRAFT_56233
Ubiquitin system [BR:
mpp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
MICPUCDRAFT_56233
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_C
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_Gbeta
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
U-box
Beta-prop_WDR36-Utp21_1st
DSE1_N
Beta-prop_EML
Beta-prop_WDR41
Beta-prop_SPT8
ASA1
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_Aladin
NBCH_WD40
Beta-prop_ACSF4
PAC11
Beta-prop_Nup120_160
Beta-prop_IP5PC_F
WDR90_beta-prop_4th
zf-RING_UBOX
WD40_MABP1-WDR62_1st
CFAP251_N
zf-Nse
Beta-prop_EIPR1
Beta-prop_NOL10_N
WD40_RFWD3
zf-C3HC4_2
WD40_like
Beta-prop_VPS8
Beta-prop_WDR75_2nd
zf-C3HC4_4
zf-C3HC4
zf-rbx1
zf-RING_2
DUF7872
Motif
Other DBs
NCBI-GeneID:
9682702
NCBI-ProteinID:
XP_003056801
JGI:
56233
UniProt:
C1MPD1
LinkDB
All DBs
Position
Unknown
AA seq
464 aa
AA seq
DB search
MAGLSIDAKAKVETPSHFQCPVSMEIMSDPVMIQTGHTYDRPSIQRWLEQGHKTCPVTGQ
RLRHLELTPNFALRTAIQQFATEHGITLSDRQLTSVTEKAVVNSVNGGEPSTSLNEGSNT
IGHTVLEGHEEIVWAVEATPSHLFSASADKSIRVWDTATRRCLHVLEEHTRPVLSLAVSH
RHGKLFSGSYDCSIRVWDMRTFRRVKALHGHTDAVRSLAVAGDKLFSGSYDATLRAYDIN
TLKPLKVLEGHTGPVRTLTILGTSLFSGSYDKTVRVWNTETLESVAVLEGHTDAVRALAA
SPVEDLKYVFSGSDDSRVRVWDASTFQCVRVFEGHEDNVRVLTADSDFLYSGSWDKTIRV
WDMRSLECVHVLEGHVEAVLALTVMDGHLISGSYDTTVRFWSTDTFNCVGKYEGHDDAVR
VLTSTGEDADCVYSGSYDGSIGFWSKPVPGGNTLANAGSTATRE
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggcggggctcagcatcgacgcgaaagcgaaggtcgaaacgccctcgcacttccagtgc
cccgtctccatggagattatgtccgatccggtgatgatccagaccgggcacacctacgac
cgcccttcgatccagaggtggctcgaacagggtcacaagacctgtccggtgaccggccag
cgcctgaggcatctcgagctcaccccgaacttcgcccttcgcacggcgattcagcaattt
gcgaccgagcacggcatcaccttgagcgatcggcagctcactagcgtgacggaaaaggct
gtggtgaacagcgtgaacggaggggagccttcgacttcgctcaacgagggttcgaacaca
atcgggcacaccgtgctggaagggcacgaagaaatagtgtgggcggtagaagcgacgccg
tcgcacttgttcagcgcgagcgcggacaagtcgatccgcgtgtgggacacggccacgagg
cgctgcttgcacgtgctggaagagcacactagaccggttctttcgctcgcggtgagccac
aggcacggcaagctgttttcgggatcgtacgactgcagtataagggtgtgggacatgcga
acgttcaggcgagttaaagccctgcacggacacacggacgcggtgcgctcgctcgcggtc
gcgggggacaaacttttcagtgggtcgtacgacgccacgctcagggcgtacgacatcaac
accctgaagccgctcaaggtgttggaaggtcacaccggtccggtgcgcacgctcacgatc
ctcgggacgtctctgttctctggatcgtacgataagacggtcagggtgtggaacacggag
accttggagtcggtcgcggtgttggagggccacacggatgcggtgagagcgctcgcggct
tccccggttgaggatttgaagtacgtgttttccggctcggacgactccagggttcgcgtg
tgggatgcttccaccttccagtgcgtgcgcgtcttcgaaggtcacgaggacaacgttcgc
gttctcaccgcggatagtgattttctgtacagtgggtcgtgggataagacgattcgcgtg
tgggacatgaggtcgctcgagtgcgtccacgtcctcgagggacacgtcgaagccgtgtta
gcactgacggtgatggacggacatctcattagcggatcgtacgacacgacggtcaggttc
tggagcacggatacgttcaactgcgtggggaaatacgagggacacgacgacgccgtgcgc
gtgctcacgtcaactggggaagacgccgactgtgtgtactcggggtcttacgacgggtcg
atcggcttttggtccaagccagtcccgggggggaacacgttggcgaacgcggggagcacc
gccacgcgggaatga
DBGET
integrated database retrieval system