KEGG   Micromonas pusilla: MICPUCDRAFT_56233
Entry
MICPUCDRAFT_56233 CDS       T02696                                 
Name
(RefSeq) WD40 repeat protein
  KO
K10260  F-box and WD-40 domain protein 7
Organism
mpp  Micromonas pusilla
Pathway
mpp04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:mpp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    MICPUCDRAFT_56233
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mpp04131]
    MICPUCDRAFT_56233
   04121 Ubiquitin system [BR:mpp04121]
    MICPUCDRAFT_56233
Membrane trafficking [BR:mpp04131]
 Autophagy
  Mitophagy
   Other mitophagy associated  proteins
    MICPUCDRAFT_56233
Ubiquitin system [BR:mpp04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     MICPUCDRAFT_56233
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_C WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR75_1st WD40_Gbeta EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_SCAP Beta-prop_WDR90_POC16_2nd U-box Beta-prop_WDR36-Utp21_1st DSE1_N Beta-prop_EML Beta-prop_WDR41 Beta-prop_SPT8 ASA1 WD40_MABP1-WDR62_2nd Beta-prop_DCAF4 Beta-prop_Aladin NBCH_WD40 Beta-prop_ACSF4 PAC11 Beta-prop_Nup120_160 Beta-prop_IP5PC_F WDR90_beta-prop_4th zf-RING_UBOX WD40_MABP1-WDR62_1st CFAP251_N zf-Nse Beta-prop_EIPR1 Beta-prop_NOL10_N WD40_RFWD3 zf-C3HC4_2 WD40_like Beta-prop_VPS8 Beta-prop_WDR75_2nd zf-C3HC4_4 zf-C3HC4 zf-rbx1 zf-RING_2 DUF7872
Other DBs
NCBI-GeneID: 9682702
NCBI-ProteinID: XP_003056801
JGI: 56233
UniProt: C1MPD1
LinkDB
Position
Unknown
AA seq 464 aa
MAGLSIDAKAKVETPSHFQCPVSMEIMSDPVMIQTGHTYDRPSIQRWLEQGHKTCPVTGQ
RLRHLELTPNFALRTAIQQFATEHGITLSDRQLTSVTEKAVVNSVNGGEPSTSLNEGSNT
IGHTVLEGHEEIVWAVEATPSHLFSASADKSIRVWDTATRRCLHVLEEHTRPVLSLAVSH
RHGKLFSGSYDCSIRVWDMRTFRRVKALHGHTDAVRSLAVAGDKLFSGSYDATLRAYDIN
TLKPLKVLEGHTGPVRTLTILGTSLFSGSYDKTVRVWNTETLESVAVLEGHTDAVRALAA
SPVEDLKYVFSGSDDSRVRVWDASTFQCVRVFEGHEDNVRVLTADSDFLYSGSWDKTIRV
WDMRSLECVHVLEGHVEAVLALTVMDGHLISGSYDTTVRFWSTDTFNCVGKYEGHDDAVR
VLTSTGEDADCVYSGSYDGSIGFWSKPVPGGNTLANAGSTATRE
NT seq 1395 nt   +upstreamnt  +downstreamnt
atggcggggctcagcatcgacgcgaaagcgaaggtcgaaacgccctcgcacttccagtgc
cccgtctccatggagattatgtccgatccggtgatgatccagaccgggcacacctacgac
cgcccttcgatccagaggtggctcgaacagggtcacaagacctgtccggtgaccggccag
cgcctgaggcatctcgagctcaccccgaacttcgcccttcgcacggcgattcagcaattt
gcgaccgagcacggcatcaccttgagcgatcggcagctcactagcgtgacggaaaaggct
gtggtgaacagcgtgaacggaggggagccttcgacttcgctcaacgagggttcgaacaca
atcgggcacaccgtgctggaagggcacgaagaaatagtgtgggcggtagaagcgacgccg
tcgcacttgttcagcgcgagcgcggacaagtcgatccgcgtgtgggacacggccacgagg
cgctgcttgcacgtgctggaagagcacactagaccggttctttcgctcgcggtgagccac
aggcacggcaagctgttttcgggatcgtacgactgcagtataagggtgtgggacatgcga
acgttcaggcgagttaaagccctgcacggacacacggacgcggtgcgctcgctcgcggtc
gcgggggacaaacttttcagtgggtcgtacgacgccacgctcagggcgtacgacatcaac
accctgaagccgctcaaggtgttggaaggtcacaccggtccggtgcgcacgctcacgatc
ctcgggacgtctctgttctctggatcgtacgataagacggtcagggtgtggaacacggag
accttggagtcggtcgcggtgttggagggccacacggatgcggtgagagcgctcgcggct
tccccggttgaggatttgaagtacgtgttttccggctcggacgactccagggttcgcgtg
tgggatgcttccaccttccagtgcgtgcgcgtcttcgaaggtcacgaggacaacgttcgc
gttctcaccgcggatagtgattttctgtacagtgggtcgtgggataagacgattcgcgtg
tgggacatgaggtcgctcgagtgcgtccacgtcctcgagggacacgtcgaagccgtgtta
gcactgacggtgatggacggacatctcattagcggatcgtacgacacgacggtcaggttc
tggagcacggatacgttcaactgcgtggggaaatacgagggacacgacgacgccgtgcgc
gtgctcacgtcaactggggaagacgccgactgtgtgtactcggggtcttacgacgggtcg
atcggcttttggtccaagccagtcccgggggggaacacgttggcgaacgcggggagcacc
gccacgcgggaatga

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