Micromonas pusilla: MICPUCDRAFT_58044
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Entry
MICPUCDRAFT_58044 CDS
T02696
Name
(RefSeq) SNF2 super family
KO
K15083
DNA repair protein RAD16
Organism
mpp
Micromonas pusilla
Brite
KEGG Orthology (KO) [BR:
mpp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpp03400
]
MICPUCDRAFT_58044
DNA repair and recombination proteins [BR:
mpp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
MICPUCDRAFT_58044
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HMG_box
HMG_box_2
zf-PARP
zf-RING_2
zf-RING_UBOX
zf-C3HC4
ResIII
zf-RING_5
HMG_WDHD1
zf-RING_11
RING_XB3-XBAT31
Protamine_like
zf-rbx1
zf-ANAPC11
zf-Nse
zf-C3HC4_2
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
9683915
NCBI-ProteinID:
XP_003058476
JGI:
58044
UniProt:
C1MTE8
LinkDB
All DBs
Position
Unknown
AA seq
1251 aa
AA seq
DB search
MSKMLTIYEEDGVREWKIAEYDCEPLYSHVVEIAKSGRARCRRCSELIAKDTVRVGVPIK
WRGGMFGWISSWQHPACLRVPGYTRDELSESIHGAKTLLTEAQLESLLDELTNPEAAELD
EIDPNASDFLVRADAPSLDAPTTLTRELLSFQREGLGWMVANEASDVRGGILADEMGMGK
TIQCISLLLHQKAKRAAERVKKAKDGVAASVADLAPRPTLVVVPTSALAQWEEEIRACTS
PNALSVLVYYADRKSLTPEVVARHDVVLTTYPVVEGEWRKVVNRDLVRCEYCGKKLLPRS
MISHKKYFCGPEAVRTAKLAKREVKRDVANEKAMRTLKIKSGKASDVVDANADVVDAKKK
KKKKPKRLDADANIAREVADAMPTISNVYKELMAKAGRPARSMYEAAHDARANPFGGGGD
DDDGSDSDDGSDSGSDSGSVMIVGETPGDDADDDVLRVVMEVSRLEEEERRRKRDHDGLM
GVGGAAKGKAKASEKQKQKSSDDTSIKKKPKRTPGPYVNFCKETRPKIVEENPGITFGEV
GKKLGEAWKKLSDDEKERYRSKVIPPEEEPKVELKVEPAVVVEARGKRTTRGASASAVVV
KEEENTDDDDAAKKASKKASKKRKSRRAGSDSDSDSDWSPTEDDAKRSQEDADSQIARAL
AMVTESSDASPDGGGSGLGAGEDDVDLSDSLLHAVTWERIVLDEAHKIKARTTNTAKCIY
ALRSAYKWCLTGTPLQNRVGELYSLVRFLRMDPHAYYFCKVKGCECKSLCWNFGPNQRAC
AECGHAGPRHYSHFNQTVINPITRYGYVGDGKKGFLTLRNDVLLPAQLRRTKAERAADVK
LPPLKIEIRETEFDEVERDFYDSLYMLTRAKFDGYVKKGSVLHNYAHIFELLSRLRQACD
HPYLVIHSKTAGATGQGAALGEKKKKNANPTDALPDDDDVCRAISIAGAEEPKHYCGLCQ
DETEADDAALAGCKHVFHRECILQYGCVAASPESGKKVTCPVCRVPLTIDLQPTDLSGVP
TRVATSIAAKKKDELPAKSILSRIDLTKYTSSTKVETLLRALREMRSGADGHLNKAIVFS
QYTSMIDIAEWRLKKEKFVVAKLLGSMPVTQRAANLKAFRDDPNVSVILMSLKSGGEGLN
LQAANYVFVLEPWWNPAVEMQARDAPAGPRGFILYFTHPSVSTFDRAVMRAHRIGQRRAV
TAVRFSTKNTIEERMMQLQEKKRLVFEGCMDGNQASLSQLTEEDLQFLFKR
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagatgctgacgatatacgaggaggacggcgtgcgagagtggaagatcgcggag
tacgactgcgagccgctgtactcgcacgtcgtcgagatcgcgaagagcggccgcgcgcga
tgtcgcaggtgcagcgagctcatcgcgaaggacaccgtccgcgtcggcgtcccgatcaag
tggcgcggcggcatgttcggatggatctcgagctggcagcatcccgcgtgcctgcgcgtc
cccggctacacgcgcgacgagctgagcgagtccatccacggcgcgaagacgctcttgacc
gaggcgcagctcgagtccctcctcgacgagctcacgaatccggaggcggcggagctggac
gagatcgacccgaacgcgagcgacttcctcgtccgcgcggacgcgccgtcgctcgacgcg
ccgacgacgctgacgcgagagctcctgtcgtttcagagggagggcctcgggtggatggtc
gcgaacgaggcgtcggacgtgagaggcgggatcctcgcggacgagatggggatggggaag
acgatccagtgcatctcgctgctgctgcatcagaaagcgaagagggcggcggagcgcgtg
aaaaaggcgaaagacggcgtcgcggcgagcgtcgcggacctcgcgcctcggccgacgctc
gtcgtcgtcccgacgtcggcgctcgcgcagtgggaggaagagatacgcgcgtgcacgtcg
ccgaacgcgctgtccgtgctcgtgtactacgcggaccgcaagtcgctcactccggaggtg
gtagcgaggcacgacgtcgtgctgacgacgtacccggtcgtggagggcgagtggaggaag
gtggtgaaccgcgacctcgtgcggtgcgagtactgcggcaaaaaacttctcccgcgatcg
atgatctcgcacaagaagtacttctgcggcccggaagcggtgcgcaccgcgaagctggcg
aagagggaagtcaagcgcgacgtcgcgaacgagaaggcgatgcgaacgctgaagatcaag
agcgggaaagcgagcgacgtcgtcgacgcgaacgcggacgtcgtcgacgcgaagaagaag
aagaagaagaaaccgaagaggctcgacgcggacgcaaacatcgcgagagaggtcgcagac
gcgatgccgaccatcagcaacgtgtacaaggagctcatggcgaaagcggggcgcccggcg
cggagcatgtacgaggccgcgcacgacgcgagggcgaatccgttcggagggggaggggac
gacgacgacggttcggattccgatgacggttcggattccggctcggattccggctcggtg
atgatcgtcggcgagacgcccggggacgacgcggacgacgacgtcctgcgcgtcgtcatg
gaggtgtcgcgcctcgaggaggaggagcggcgacggaagcgcgaccacgacgggctcatg
ggcgtcgggggagcggcgaagggtaaagcgaaggcgtcggagaagcagaagcagaagtcg
tcggacgatacgagtataaagaagaagccgaagcgaacgcccggtccgtacgtgaacttt
tgcaaggagacgcggccgaagatcgtcgaggaaaacccgggaatcacgttcggcgaggtc
gggaagaaactcggcgaggcgtggaagaagctgagcgacgacgagaaggagcgataccgc
tcgaaggttataccgcccgaggaggagcccaaggtggagctcaaggtggagcccgccgtc
gtcgtcgaggcgcgggggaagcgaaccacgcgcggcgcgagcgcgagcgccgtcgtcgtc
aaggaagaggagaacaccgatgacgacgacgccgcgaagaaggcgtcgaagaaggcgtcg
aagaagcgcaagtccagacgcgccgggagcgactccgactccgactccgactggtccccg
accgaggacgacgcgaagcggtcccaggaagacgcggactcgcagatcgcgcgcgcgctc
gcgatggtaacagagtcctccgacgcgtccccggacggcggcggctccggcctcggcgcc
ggcgaagacgacgtcgacctctccgactcgctcttgcacgcggtgacgtgggaacggatc
gtcctggacgaggcgcacaagatcaaagcgcgaacgacgaacaccgcgaagtgcatatac
gccctgcgcagcgcgtacaagtggtgcctgaccgggacgccgctgcagaaccgcgtcggg
gagttgtactcgctcgtgcgtttccttcgcatggacccgcacgcgtattacttttgcaaa
gtcaaaggctgcgagtgcaagtctctgtgttggaacttcggcccgaaccagcgcgcgtgc
gcggagtgcgggcacgccgggccgaggcattactcgcacttcaaccagacggtgatcaac
ccgatcacgcggtacggatacgtcggcgacggcaagaagggtttcctcacgctccgcaac
gacgtcctcctccccgcgcaactccgtcggacgaaggcggagagagccgcggacgtgaag
ctgccgccgctgaagattgagattcgcgagactgagttcgacgaggtcgagcgcgacttc
tacgactcgctgtacatgctcacgagggccaagttcgacgggtacgtcaagaagggcagc
gtcttgcacaactacgcgcacatcttcgaactgctctcgcggctgcgtcaggcgtgcgac
cacccgtacctcgtgattcactccaagaccgcgggcgcgaccgggcagggcgcggcgctc
ggggaaaagaagaagaagaacgcgaacccgaccgacgcgcttccggacgacgacgacgtc
tgccgcgccatctccatcgccggcgcggaggagccgaagcattactgcggcttgtgccag
gacgagaccgaggcggacgacgccgcgctcgcgggatgcaagcacgtgttccaccgcgag
tgcatactgcagtacggctgcgtcgcggcgtcgccggagagtgggaagaaggtgacgtgc
ccggtgtgccgcgtcccgctgacgatcgatttgcaaccgaccgacctctccggggtgccg
acgcgcgtcgcgacgtccatcgcggcgaagaaaaaagacgagctccccgcgaagagcatc
ttgtcgcgcatcgacctcacgaagtacacgagcagcaccaaggtggagacgctcctgagg
gcgcttcgcgagatgcgctcgggcgcggacgggcacctgaacaaggcgatcgtgttctcg
cagtacacgtccatgatcgacatcgcggagtggcgtctgaaaaaggaaaagtttgtcgtc
gcgaagctgttggggtccatgccggtgacgcaacgcgcggcgaatttgaaagcgttcagg
gacgacccgaacgtcagcgtgatcctgatgtcgctcaagtccggcggcgaggggttgaac
ttgcaggccgccaactacgtcttcgtgctcgagccgtggtggaaccccgcggtggagatg
caggcgcgcgacgcgcccgccggtccgcgcggtttcattttgtatttcacccacccctcg
gtgtcaacgtttgaccgcgcggtgatgcgcgcgcatcgcatcggacagagacgcgcggtg
accgcggtgcgattttcaacgaagaacaccatagaggagcgcatgatgcagctgcaggag
aagaaacggctcgtgttcgaggggtgcatggacgggaaccaggcgagcttgtcgcagctc
accgaggaagatttgcagtttttgttcaagcggtga
DBGET
integrated database retrieval system
