KEGG   Myroides profundi: MPR_2947
Entry
MPR_2947          CDS       T03631                                 
Name
(GenBank) DNA ligase (NAD+)
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
mpw  Myroides profundi
Pathway
mpw03030  DNA replication
mpw03410  Base excision repair
mpw03420  Nucleotide excision repair
mpw03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mpw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MPR_2947
   03410 Base excision repair
    MPR_2947
   03420 Nucleotide excision repair
    MPR_2947
   03430 Mismatch repair
    MPR_2947
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mpw03032]
    MPR_2947
   03400 DNA repair and recombination proteins [BR:mpw03400]
    MPR_2947
Enzymes [BR:mpw01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     MPR_2947
DNA replication proteins [BR:mpw03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     MPR_2947
DNA repair and recombination proteins [BR:mpw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     MPR_2947
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MPR_2947
   MMR (mismatch excision repair)
    DNA ligase
     MPR_2947
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      MPR_2947
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 DNA_ligase_ZBD PTCB-BRCT BRCT_2 DNA_ligase_A_M
Other DBs
NCBI-ProteinID: AJH16085
UniProt: A0A0B5RMN8
LinkDB
Position
complement(3307077..3309074)
AA seq 665 aa
MDIKAQLDLLRKELNEHNYNYYVLDNPTISDFDFDQKLKELEKLELAHPEYFDINSPTQR
VGGTVTKNFDTIVHRYRMYSLDNSYSKEDLLDWEQRVQKVLGDVPVEFTCELKYDGASIT
ITYEDGVLVRAVTRGDGVQGDDVTNNIRTIRSVPIRLNGDYPQSFDIRGEIVLPLAGFEK
MNQDLIEIGETPYSNPRNTASGSLKLQDSAEVAKRPLDCLLYNIVGSDLGVTTQYESLDK
ARAWGFKVPTISKLAKNIDEVLEFINYWDIHRHELPYETDGVVIKVNSLHYQDELGYTSK
APRWAIAYKFKAEQAETVLNSISYQVGRTGAITPVANLEPVQLAGTIVKRASLHNADQIA
KLDIRVNDSVYVEKGGEIIPKIVGVNLEARPADSERTVYIKECPECGTKLKRNEGEAQHY
CSNVYGCPPQIAGRIQHFISRKAMDIDGLGEETVVLLYKNELVENYADLYELKKEDVLGL
ERMGEKSADNLINGIEASKQIPFERVLYALGIRYVGETVAKKLANHYKTIDALAEAPLME
LITVDEIGERIAQSVIDFFSSDVNKEIIARLKEYGLQFVLEEKESTVVSDVLLGQTLVVS
GVFEQMSRDEIKQAIEDHGGKVGSSITSKTHYVVAGDKMGPSKLEKANKLGIKILTEAEF
IALIQ
NT seq 1998 nt   +upstreamnt  +downstreamnt
atggatattaaagcacaattagatttacttcgcaaagaattaaatgaacataattataat
tattatgtgttggataatccaacgatttcagatttcgattttgatcagaaattaaaagaa
ttagagaagttagagttagctcatccagaatattttgatattaattctccaacacaaaga
gtaggaggtacggtgactaaaaactttgatactatagtacaccgttatagaatgtattct
ttagataactcttattctaaggaagatttgttagactgggaacaacgtgtacagaaggta
ttaggtgatgtgccagtagagtttacttgtgaattaaagtatgatggagcttctattacg
attacgtatgaagatggagtactagtaagagcagtgacacgtggtgatggagtacaaggg
gatgatgtgactaataatattagaacaattagatcagttcctattcgattaaatggagat
taccctcagagttttgatattcgtggagagatagtattgccattggcagggtttgaaaaa
atgaatcaagatttgatagaaatcggagagacgccttattctaatccaagaaataccgct
tctggtagtttgaaattacaagatagcgctgaggttgcaaaacgtcctttggattgtcta
ctttataatatagtaggaagtgatctaggagtaacaacacaatatgaaagtttagacaaa
gctagagcatggggatttaaagttcctactatctctaagttagctaagaatattgatgaa
gtattagagtttataaattattgggatattcatagacatgaacttccttatgagacagat
ggtgtggtgatcaaggttaattcattgcattatcaagatgaattaggatatacttctaaa
gcaccgagatgggctatagcatataagtttaaagctgaacaagcagagactgtattgaac
tctatttcttaccaagtaggtagaacaggtgctataactcctgtagcaaacttggaacct
gtacaattggcaggaacgatagtgaaacgtgcttctttacacaatgctgatcagatagcg
aagttagatattcgtgtgaatgactctgtatatgtggaaaaaggaggagagattattccg
aaaatagtaggtgtgaatttagaggctagaccagctgattctgaacgtacagtatatatt
aaggaatgtcctgaatgtggtactaagttaaagagaaatgaaggggaggcacagcattat
tgttcaaatgtgtatggatgtccacctcaaatagcgggtagaatacaacactttatctct
cgtaaggcgatggatatagatggtctgggagaagaaactgtggtactgttatacaagaat
gaattagtagagaattacgctgacttatacgagttaaagaaagaggatgttctaggttta
gaacgcatgggagagaagtctgcagataatctgataaatggtatagaagcttctaaacag
attccttttgaacgtgtattatacgcattagggatccgttatgtaggagagactgtggct
aaaaagttagcgaatcattataagacaatagatgctctggcagaagctccattaatggag
ttgataacagtagatgagattggtgaaagaatagcacaaagtgtaatagacttctttagt
agtgatgttaataaagaaataattgctagattaaaagagtatggtctacaatttgtgtta
gaagaaaaggagtctacagtagtgtcagatgttctactaggacagacattagtggtatct
ggggtgtttgaacaaatgtctcgtgatgagattaaacaagctatcgaagatcatggagga
aaagtaggaagttctattacttctaagactcactatgtcgtagcaggagataaaatggga
ccatctaagttggaaaaagcgaataaactaggtattaaaatattaacagaagcggagttt
attgcgttaattcaataa

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