Melissococcus plutonius DAT561: MPD5_1267
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Entry
MPD5_1267 CDS
T01763
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mpx
Melissococcus plutonius DAT561
Pathway
mpx03030
DNA replication
mpx03410
Base excision repair
mpx03420
Nucleotide excision repair
mpx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mpx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MPD5_1267
03410 Base excision repair
MPD5_1267
03420 Nucleotide excision repair
MPD5_1267
03430 Mismatch repair
MPD5_1267
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpx03032
]
MPD5_1267
03400 DNA repair and recombination proteins [BR:
mpx03400
]
MPD5_1267
Enzymes [BR:
mpx01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MPD5_1267
DNA replication proteins [BR:
mpx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MPD5_1267
DNA repair and recombination proteins [BR:
mpx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MPD5_1267
NER (nucleotide excision repair)
GGR (global genome repair) factors
MPD5_1267
MMR (mismatch excision repair)
DNA ligase
MPD5_1267
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MPD5_1267
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
BRCT_2
Nlig-Ia
Motif
Other DBs
NCBI-ProteinID:
BAL62483
LinkDB
All DBs
Position
1:complement(1415831..1417867)
Genome browser
AA seq
678 aa
AA seq
DB search
MEDKHPLTLTEATDRADELKEQLNQYSYEYYVQDKPSVEDYVYDRLYKELSEIETAYPDL
ITSDSPTQRVGGKILPGFEKVHHDSTMYSLNDGFSKEDIYNFDERIHRLTDQPFTYCCEL
KIDGLAISLRYKNGELVLGATRGDGTIGENITENLKTVRSIPLRLNKSISIEVRGECYMP
KTSFVRLNQEREEEGCDIFANPRNAAAGSLRQLDSRITAKRNLNTFLYTVADFGSMTAKN
QFDALNELTTIGIRTNPEKRLCQTIDEVWSFIEEYHEKRNELPYEIDGIVIKVNEFSEQN
KLGFTVKAPRWAIAYKFPPEEARTTVNEIEWTVGRTGVVTPTAIMDPVRIAGTTVSRASL
HNFDFIQMKDIRLKDEVIIYKAGDIIPEIAKALVETRTNESVPYQAPSHCPVCQSELVHL
DEEVALRCINPKCPAQIKEGLNHFVSRNAMNIAGLGPRILAQLYEKKLVKDVADLYFVTE
EQLMTLEKIKEKSANNIYQAIAASKNNSVEHLIFGLGIRHVGAKAAKILAEHFGDLKTLS
QANQESIMVLDSIGEIIAESVVAYFEKIEVQELLVELEKAGINFKYTGTRPEQLNGDSFF
KNKTVVLTGKLTNYTREEAKEQIESLGGNVTNSVSKKTDIVVAGEASGSKLAAAKELEVT
VWDENQLTEALENHHPTV
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggaagataagcatccattaacattaactgaagcgaccgatcgagcagacgaattaaaa
gaacaacttaatcagtattcttatgaatattatgttcaggacaaaccaagtgttgaagat
tatgtttatgatcgtttgtataaggagttaagcgagattgaaacagcctatccagacttg
attacttctgactcaccgacgcagcgtgttggtggaaaaatcttaccagggttcgaaaag
gtccatcatgatagcaccatgtatagtttgaatgatggttttagcaaagaagatatttat
aattttgatgaacgaattcatcgtctaactgatcaaccctttacctactgttgtgagttg
aaaattgatggacttgctatttcgttacgttataaaaatggcgagcttgttcttggagct
actcgtggagatggaaccattggtgagaatattacagaaaatttgaaaacagttcgatca
attcctttaagattaaacaagtctatatcaattgaagtccgaggagaatgttatatgcca
aagacatctttcgttcgtttgaatcaggaacgtgaggaagaaggatgtgatatttttgct
aatccaagaaatgcagcggcaggtagtctaagacaattagattcacgaatcactgctaag
cgtaatttaaatacatttttatatacggtagctgattttggctcaatgacagctaaaaat
caatttgatgcattgaatgaactaactacaattggaatacgtacaaatcctgaaaaacgg
ttatgtcaaaccattgatgaagtttggtcttttatcgaagaatatcatgagaaacgtaat
gaacttccttatgaaattgatggcattgttattaaagtaaatgaattctctgaacaaaat
aaactaggttttacggtaaaagcaccacgttgggcaattgcgtataaatttccgccagaa
gaagctagaacaacagtgaatgaaattgaatggactgttggaagaacaggcgttgtgacg
cccacagcaattatggatccagttagaattgctggtacaaccgttagtcgtgccagttta
cacaattttgattttattcaaatgaaagatattcgtttaaaagatgaagtaatcatttat
aaagcaggcgatattattccagaaatagcaaaagcattggttgaaacaagaactaatgag
agtgttccatatcaggcacccagtcattgcccagtttgtcaaagtgaattggttcatttg
gatgaagaagtagcattacgttgcatcaatccaaagtgtcccgctcaaattaaagaggga
cttaatcattttgtttccagaaatgctatgaatattgcaggtttaggacctagaatttta
gcacaactatatgaaaaaaaattggtaaaagatgtcgccgatctttactttgttactgaa
gaacaattgatgactttagaaaaaatcaaagaaaaatctgcaaataatatctaccaagca
attgcagcaagtaaaaataactcagtcgaacacttaatttttggattaggaattcgtcat
gtgggtgcaaaggcggcaaaaattctagcagaacactttggtgatttaaaaacactttca
caggcaaatcaagaaagtattatggtgctagattcaattggagaaatcattgctgaaagt
gtagttgcctattttgaaaaaatagaagtccaggaactgttagtcgaattagaaaaagct
ggtataaactttaaatataccgggactcgacctgagcaattaaatggtgattctttcttt
aaaaataaaacggtagttttaactggaaaattaacaaactatactagagaagaagcgaaa
gagcaaattgaaagtcttggtggaaatgtcaccaatagcgtctctaaaaaaacagatatt
gtcgttgctggagaagcttctggtagtaaattagccgcagcgaaagagctagaggtaaca
gtttgggatgaaaatcagttgacagaagcactagagaatcatcatccaactgtatga
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