Mumia qirimensis: AB3M34_14795
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Entry
AB3M34_14795 CDS
T10923
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mqr Mumia qirimensis
Pathway
mqr03030
DNA replication
mqr03410
Base excision repair
mqr03420
Nucleotide excision repair
mqr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mqr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AB3M34_14795 (ligA)
03410 Base excision repair
AB3M34_14795 (ligA)
03420 Nucleotide excision repair
AB3M34_14795 (ligA)
03430 Mismatch repair
AB3M34_14795 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mqr03032
]
AB3M34_14795 (ligA)
03400 DNA repair and recombination proteins [BR:
mqr03400
]
AB3M34_14795 (ligA)
Enzymes [BR:
mqr01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
AB3M34_14795 (ligA)
DNA replication proteins [BR:
mqr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AB3M34_14795 (ligA)
DNA repair and recombination proteins [BR:
mqr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
AB3M34_14795 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AB3M34_14795 (ligA)
MMR (mismatch excision repair)
DNA ligase
AB3M34_14795 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AB3M34_14795 (ligA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
HHH
Prot_ATP_ID_OB_C
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
XEK82243
UniProt:
A0ACH2NZC6
LinkDB
All DBs
Position
complement(3068072..3070168)
Genome browser
AA seq
698 aa
AA seq
DB search
MESPPDEAAARGRHAELSETIEQARTRYFVDDEPTISDAEYDRLMVELRELEDAFPQLRT
PDSPTQTVGGTVSTAFTPVRHRRRMESLDNCFSFDELSAWGARVEKEAGKESDFLVELKV
DGLAINLTYESGRLVRAATRGDGTVGEDVTANVRTIDGIPHRLTGSDEHPVPSFLEVRGE
IYFPTQAFEEFNAAWSEAGNTPLSNPRNGAAGSLRQKDPRVTASRPLRMVCHGIGDREGY
VPERQSDAYTALKSWGLPTSDRVRVLSTMAEVEEFITYYGEHRHDVEHDIDGVVVKVDQI
SLQRALGSTSRAPRWAIAFKYPPEEVNTTLLDIRVNVGRTGRVTPYGVMEPVLVSGSTVE
MATLHNASEVARKNVRPGDTVVLRKAGDVIPEIVGPVLALRPDDAEPWVMPTECPSCGTT
LAPSKEGDADLRCPNTQRCPAQLRERLFHVGSRGALDIEVLGYEAASALLDAEVLTDEGG
LFSLGEEDLLRVPLFTRAAKKAEREAGAGEKVLSANGRRFLDNLGHAKTQPLWRVVVALS
IRHVGPTAARALAAELGSIDAIRAADAETLAAVDGVGPTIAVSVAEWFAVDWHRDIVDQW
AAAGVRMADERDASITRTLEGLTIVVTGSLQGFTRDEAKEAILARGGKASGSVSKKTSYV
VVGESAGSKAAKAEELGVPVLDEDGFAELLRDGPSVSA
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atcgagagcccgcctgacgaggccgctgcccgcggacggcatgccgagctgagcgagacg
atcgagcaggcgcgcacccgctacttcgtcgacgacgagccgacgatctccgacgccgag
tacgaccggttgatggtcgagctccgtgagctcgaggacgcgttccctcagctgcggacc
cccgactcgccgacccagacggtcggcggcaccgtctcgacggccttcacacccgtccgc
caccgcaggcgcatggagagcctcgacaactgcttctcgttcgacgagctgtcggcgtgg
ggcgcccgcgtcgagaaggaagcgggcaaggagagcgacttcctcgtcgagctcaaggtc
gacgggctggcgatcaacctcacctacgagtcagggcggctggtccgggccgcgacccgc
ggcgacggcacggtgggtgaggacgtcaccgccaacgtccgcaccatcgacggcatccct
caccgcctgaccgggtccgacgaacatcccgtgccgtccttcctcgaggtgcgcggcgag
atctacttccccacgcaggcgttcgaggagttcaacgccgcgtggagcgaggccggcaac
acccccctctccaacccgcgcaacggagcggccgggtccctccgccagaaggacccacgc
gtcacggcgagccgtccgctgcggatggtctgccacggcatcggagaccgcgagggctac
gtccccgagcgtcagtccgacgcctacaccgcgctcaagtcctgggggcttcccaccagc
gaccgggtgcgggtgctgtcgacgatggctgaggtcgaggagttcatcacctactacggc
gagcaccggcacgacgtcgagcacgacatcgacggggtcgtggtcaaggtcgaccagatc
tcgctccagcgggcgctcgggtcgacctcgcgcgcccctcggtgggcgatcgccttcaag
taccctcccgaggaggtcaacacgaccctcctcgacatccgggtcaacgtcggccgcacc
ggccgcgtcaccccgtacggcgtcatggagccggtgctcgtctccggctcgaccgtcgag
atggcgacgctccacaacgcgtcggaggtcgcccgcaagaacgtccggcccggtgacacc
gtcgtgctccgcaaggcgggagacgtgatccccgagatcgtcggaccggtgctcgccctt
cggcccgacgacgccgagccgtgggtgatgcccaccgagtgcccctcgtgcggcaccacc
ctcgccccgtcgaaggagggtgacgccgacctgcgctgccccaacacccagaggtgcccg
gcgcagctgcgggagcggctcttccacgtcgggagccgcggcgcgctcgacatcgaggtc
ctcggctacgaggccgccagcgcgctgctcgacgccgaggtcctcaccgacgagggtggc
ctgttctccctcggtgaggaggatctgctccgcgtcccgctgttcacccgtgctgccaag
aaggccgagcgtgaggcgggtgcgggagagaaggtgctctccgcgaacggacgccgtttc
ctcgacaacctcggccacgccaagacgcagccgctgtggcgcgtcgtcgtcgcgctgtcg
atccgccacgtcggcccgaccgcggcgcgcgcccttgccgctgagctcggcagcatcgac
gcgatccgtgccgcggacgcggagacgctcgcagcggtcgacggcgtcggaccgacgatc
gcggtgtcggttgctgagtggttcgccgtcgactggcaccgcgacatcgtcgaccagtgg
gcggcggccggtgtccggatggccgacgagcgcgacgcgtcgatcacccggacgctcgag
ggactcaccatcgtcgtcacgggctcactgcagggcttcacccgcgacgaggccaaggaa
gcgatcctcgcgcgcggcgggaaggcatccgggtcggtctccaagaagacgagctacgtc
gtcgtcggagagtccgcaggatccaaggccgcgaaggccgaggagctcggcgtgcccgtc
ctcgacgaggacgggttcgccgagctcctgcgcgacgggccgtccgtcagcgcttga
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