Muntiacus reevesi (Reeves' muntjac): 136166379
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Entry
136166379 CDS
T10466
Symbol
SMCHD1
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein 1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
mree Muntiacus reevesi (Reeves' muntjac)
Brite
Chromosome and associated proteins [BR:
mree03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
136166379 (SMCHD1)
DNA repair and recombination proteins [BR:
mree03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
136166379 (SMCHD1)
BRITE hierarchy
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136166379
NCBI-ProteinID:
XP_065788587
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Position
4:35213779..35337198
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AA seq
1997 aa
AA seq
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MAAAGGDGPSVETGEGGGADGPRTVYLFDRREKESELGDRALQVEEDSDFAAFRASVCQT
LGISPGEKFVITTTSRKEITSDNFDETVKDGVTLYLLQSVNQLLLTATKERIDFLPHYDT
LVKSGMYEYYASEGQNPLPFALAELIDNSLSATSRNTGVRRIQIKLHFDETQGKPAVAVI
DNGRGMTSKQLNNWAVYRLSKFTRQGDFESDHSGYVRPLPVPRSLNSDISYFGVGGKQAV
FFVGQSARMISKPVDSQDVHELLLSKEDFEKKEKNKEAIYSGFIRNRKPSDSSHITNDDE
RFLHHLITEEKEKDSFTAVVITGVQPEHMQYLKNYFHLWTRQLAHIYHYYIHGPKGNEKR
ISKEAGPFNNIDIEISMFEKGKTPKIINLRGIQDDMQTLYINTAADSFEFKAHVEGDGVV
EGIIRYHPFLYDRETYPDDPCFPSKLKDEDDDDDCFILEKAARGKRPIFECFWNGRLIPY
TSVEDFDWCAPPKKRGLAPFECYNRISGALFTNDKFQVSTNKLTFMDLELKLKDKNTLFT
RILNGQEQRMKIDREFALWLKDCHEKYDKQIKFTLFKGVITRPDLPSKKQGPWATYSAIE
WDGKIYKAGQLVKTIKTLPLFYGSIVKFFLYGDHDGEVYATGGEVQIAMEPQALYDEIKT
VPIAKLDRTVAEKAVKKYVEDEMARLPDRLSVTWPEGDELLPNEIRPAGTPIGALRIEIL
NKKGEAMQKLPGTSHGGSKKLLVELKVVLHSSSGNKEIISHISQHGGKWPYWFKKMENIH
KLGNYTLKLQVVLNESNADTYAGRPLPSKAIKFSVKEGKPEKFSFGLLDPPFRVGVPFNI
PVEFQDEFGHASQLSTDIQPVFEASGLTLHYEEITKGPNCVIRGVTAKGPVNSCQGKNFN
LKVILPGLKEDSQILKIRLLPGPPHQLKVKPDSEILVIENGTAFPFQVEVLDESDNITAQ
PKLIVHCKFSGAPNLPVYVVDCSSSGTSILSGPAIQVQNIKKDQTLKAKIEIPSCKDVAP
VEKTIKLLPSSHVARLQIFSVEGQKAIQIKHQDEVNWIAGDVMHNLIFQMYDEGEREIHI
TSALAEKIKVNWTPEINKEHLLQGLLPDVQVPTSVKDMRYCQVSFQDDHVSLESAFTVRP
LPDEPKHLKCELKGGKTVQMGQELQGEIVVTVTDQFGNQIQAFSSSSLSALAIAGIGLDS
SHLKTTFQENTQSISVRGVRFIPGPPGNKDLCFTWREFSDFIRVQLVSGPPAKLLLVDWP
ELKESIPVINGRELQNPLIVQLCDQWDNPAPVPQVKISLVKANNLKLTPSNQQHKTDERG
RANLGVFSVFAPRGEHIMQVKAIYNKNTIEGPVIKLMILPDPEKPIRLNVKYDKDASFLA
GGIFTDFMITVISEDDSIIKNINPARISMKMWKLANSGNRPPANVEIFSCNKIKDNDKED
GCFYFRDKAIPNKVGTYCIQFAFTMDKTNILNSEQIIVDVLPNQPVKLVPEVQPATPAVS
NVRSVASRTLVKDLYLHITDDYNNHTGVDLVGTVMATIKGSNEEDDIPLFNGKIRTLEFP
FVKGSAEITSLVLAENSPGRDSTEYFIVFEPRLPALSRTLESYILPFMFYNDVKKQQQMA
ALTKEKDQLSKSITVYRTLFDTSKQLLDEMKCQVEEAKLKEAQLRNELKNHNIDISTTQQ
MPHIEALLKRKLSEQEELKKKPRRSCTLPNYTKGSGDVLGKIAHLAQIEDDRAAMVISWH
LASDMDCVVTLTTDAARRIYDETQGRQQVLPLDSIYKKTLPDWKRPLPHYRNGRLYFKPI
GDPVFARDLLTFPDNVEHCETVFGMLLGDTIILDNLDAANHYRKEVVKITHCPTLLTRDG
DRIRSNGKFGGLQNKAPPMDKLRGMVFGAPVPKQCLILGEQIDLLQQYRAAVCRLGSVNE
DLNGQLKYLHTPDMKRKKQELDEHEKNLKLIEQKLGMTPTRKCNDSLPHPVTDCPVPPKR
IRREAARQNRIITKTDV
NT seq
5994 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggcgggtggcgacgggccttcggtggagaccggagagggtggcggagccgac
ggccccaggacggtgtacttgtttgaccggcgcgagaaggagtcggagctcggggaccgg
gcgctgcaggtcgaggaggactcggacttcgcggcgttccgcgcctccgtgtgtcagaca
cttggcatttcacctggagagaaatttgtcattacaacaacaagtaggaaagaaattacc
agtgataactttgatgaaactgttaaagatggagtcactctatacctgctacagtcagtc
aatcagttactgctaacagctactaaagaacgaattgacttcctacctcactatgacaca
ttggttaaaagtggcatgtatgaatattatgcaagtgaaggacaaaatcctttaccattt
gctcttgcagaattaattgacaattctttgtctgctacttctcgtaacactggtgttaga
agaatacagatcaaattgcattttgatgaaacacaaggaaaacctgccgttgcagtgata
gataatggaagaggaatgacctctaaacagcttaacaactgggccgtgtataggttgtca
aaatttacaaggcaaggtgactttgaaagtgatcattcaggatatgttcgaccactgcca
gtacctcgcagtttaaatagtgatatttcctattttggtgttgggggcaagcaggctgtt
ttctttgttggacagtcagccagaatgataagtaagcctgtagactcccaggatgttcat
gaacttttactttctaaagaagattttgagaagaaagagaaaaataaagaggcaatatat
agtggatttattagaaatagaaagccgtctgattctagtcacattacaaatgatgatgaa
cgatttctacatcatcttatcacagaggagaaggaaaaagatagctttactgctgtggtt
atcacaggggtacaaccagaacacatgcagtacttgaaaaattatttccatctttggacc
agacagttagcacatatttatcattattacatccatggtccaaaagggaatgaaaaacgt
atatcaaaggaagctggacctttcaacaacattgatattgaaatttctatgtttgaaaag
gggaagacacctaagattatcaacctgaggggaatacaagatgacatgcagacattgtat
ataaatacagcagccgatagttttgagttcaaggctcatgttgaaggagatggtgtagtg
gaagggattatccgatatcaccctttcttatatgatagagaaacctaccctgatgatcca
tgttttccatcaaaattaaaagatgaagatgatgatgatgactgtttcatacttgagaaa
gcagcaagagggaaaaggcctatttttgaatgtttttggaatggacggctaataccatat
acatctgttgaggactttgactggtgtgctcctcctaagaagagagggcttgcgcctttt
gagtgctacaataggatatctggtgcattatttactaatgacaaattccaggtcagcaca
aataaactgacctttatggatcttgagctaaaactgaaagacaagaacaccctttttaca
aggattttaaatggacaggagcagcgaatgaaaattgacagagagtttgctttatggctg
aaggactgccatgaaaagtatgacaaacaaataaaattcaccctttttaaaggagtaatt
acacgtcctgatcttccttctaaaaagcagggcccctgggccacttactcagcgatagaa
tgggatggaaaaatatacaaagcaggacagctggtcaagacaatcaagacacttcctctc
ttttatggaagcattgtgaaattttttctctatggtgatcatgatggagaagtatatgct
acaggaggagaggttcaaattgcaatggaacctcaggcactatatgatgaaataaaaact
gtgccaattgcaaagctggataggacagttgctgagaaagctgtgaaaaaatatgtagaa
gatgaaatggcaagactccctgatagattgtcagtgacttggcctgaaggagatgaatta
ttgccaaatgagatcagacctgctggaacccccattggtgcattaagaattgaaatatta
aataaaaaaggggaagcgatgcagaagcttccaggaacaagtcatggagggtcaaagaaa
ctcctggttgaactcaaagttgtattacactcttcaagtggaaataaagaaatcatttca
catattagtcaacatggaggaaaatggccatactggtttaaaaaaatggaaaatattcac
aagttgggaaattatacattgaaattgcaagttgtcctgaatgaaagtaatgcagacact
tatgcaggaaggccactaccatctaaagcaattaaattttctgttaaagagggtaaacca
gagaaattttcattcggtcttttggatcctccgtttcgtgttggagtcccattcaatatc
cccgtggagtttcaggatgaatttggtcatgctagtcaactatcaactgatattcagcca
gtttttgaagcaagtggtttaactttacattatgaagaaataaccaaaggaccaaattgt
gtcattcgaggtgttacagctaagggccctgtaaactcttgtcaaggcaagaattttaat
ctgaaggttattctgccgggtttaaaagaagactcacagattttaaaaattagattactt
ccaggtcctcctcatcaattgaaagtgaaacctgattctgaaattttagttatagaaaat
ggaacagctttcccctttcaggtggaagttttggatgaatcagacaatataacagcacaa
ccaaagctgattgttcactgtaagttttcaggtgctccaaaccttccagtctatgttgtg
gattgcagtagttctggaactagtattttatcaggaccagcaattcaagttcagaatatt
aaaaaagaccagacacttaaagcaaaaattgaaatacctagttgtaaagatgtggcacca
gtggagaagactattaagttgctccccagtagccacgttgccagattacagatattcagt
gtggaaggacagaaggccatccagatcaaacatcaggatgaggttaactggatagctgga
gatgttatgcataatcttatttttcaaatgtatgatgaaggagaaagagaaatccatata
acatcagctttggcagagaaaattaaagttaattggactcctgagattaacaaagagcac
ttactgcagggtctgcttcctgatgtacaagtaccaacatctgtgaaagatatgcgctat
tgccaggtttcattccaagacgatcatgtgtctttggaaagtgcatttacagtaagacca
cttccagatgaacctaaacatctaaagtgtgaattaaaaggaggaaaaacggtacagatg
ggtcaagagcttcaaggagaaatagttgtaactgttacagatcagtttgggaatcagatt
caagcattttcatcaagttctctgtctgcgttggcaattgctgggattggacttgatagc
tcacatttgaaaactacttttcaggaaaatacacaaagtataagcgtgagaggagtcaga
tttattccaggtccccctggaaataaggatctttgctttacttggcgtgaattttctgac
tttattcgagtgcagctagtttctgggccaccagctaaacttcttcttgtagactggcca
gagttaaaggagtccattccagtgattaatggaagagaattgcagaatcctctcattgta
caactttgtgatcagtgggataatccagcacctgtgccacaggttaaaataagtcttgta
aaagctaacaatttaaagctcactccttcaaaccaacagcataaaaccgatgagaggggc
agggctaatttgggagtgttcagtgtttttgcccctagaggagaacatattatgcaggtt
aaagccatttataacaagaataccatagaaggacccgtaattaagttaatgattcttcca
gaccctgaaaaacccattcgtctcaatgttaaatatgacaaagatgcttcctttttagca
gggggtattttcactgattttatgattactgttatttctgaagatgacagtatcattaaa
aatattaatccagcacgtatttccatgaaaatgtggaaactggcaaacagtgggaaccga
ccgccagcaaatgtagaaatatttagttgtaataaaataaaggataatgacaaagaagat
ggctgcttctacttcagggataaagcaattcctaacaaggtggggacatactgtatccag
tttgcttttacgatggataaaacaaatattcttaacagtgagcagattatagtggatgtt
ctacctaatcaacctgtgaagttagttcctgaagttcagccagctacaccagctgtttca
aatgttcgctcagttgccagtaggaccctggtcaaagatttgtatcttcatatcacggat
gactacaacaatcatactggagttgatttggttggcactgtaatggctaccattaaaggt
tctaatgaggaagatgacatacctctctttaatgggaaaattagaacacttgaatttccc
tttgtgaaaggttcagctgaaatcacgagtctagtgctagcagaaaacagtcctggaagg
gatagtactgaatattttattgtgtttgagcctcggctgccagctttatcaagaacgtta
gaatcatatatcctgccatttatgttttacaatgatgttaagaagcagcaacaaatggca
gcacttacaaaagaaaaggaccaattatccaagtctattacagtgtacagaactttattt
gataccagcaagcagcttcttgatgagatgaagtgccaagttgaagaagcaaaattaaaa
gaggcccagttgcgaaacgaactgaaaaaccacaatattgacatttctacaacacagcag
atgccacacattgaagcacttttgaaaagaaagctatcagaacaggaagaactaaagaaa
aaacccagaagatcatgtactcttccaaattatactaaaggcagtggagatgttttggga
aagattgcacacctggcgcagattgaagatgatagagctgccatggtcatctcctggcac
ctggcaagtgacatggactgtgtggtcaccctgaccactgatgctgcacgtcggatttat
gatgaaacccaaggtcgtcagcaggtgttgccccttgattctatttataagaagactctt
ccagattggaaaagacctctacctcattaccgaaatggaagattgtattttaaacccatt
ggagaccccgtctttgcccgagacttgttaacttttccagataacgtagaacactgtgaa
acagtatttggtatgctgttaggagacactattattttggataatttggatgctgccaat
cattacagaaaagaggttgttaaaattacacactgtcctacactgctgaccagagatgga
gatcgcattcgaagtaatgggaaatttgggggccttcagaataaagctcctccaatggat
aaactccggggaatggtgtttggagctccagtaccaaaacagtgcctgatcttaggggag
caaatagatcttcttcagcagtaccgcgctgctgtgtgcaggctgggcagcgtgaacgag
gacctcaacgggcagctgaagtaccttcacactcccgacatgaagaggaagaaacaagaa
cttgatgaacacgaaaagaatctcaaactgatagagcaaaaactaggaatgactcccaca
cgtaaatgtaatgattcactgcctcatccagtgacagactgtccagttcctcccaaaaga
ataagaagagaggctgcaagacaaaacaggattataaccaaaactgatgtgtga
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integrated database retrieval system
