Marinomonas rhizomae: KDW99_13765
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Entry
KDW99_13765 CDS
T08610
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
mrhi
Marinomonas rhizomae
Pathway
mrhi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mrhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KDW99_13765 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrhi03400
]
KDW99_13765 (nth)
Enzymes [BR:
mrhi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KDW99_13765 (nth)
DNA repair and recombination proteins [BR:
mrhi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KDW99_13765 (nth)
Prokaryotic type
KDW99_13765 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UTV98327
LinkDB
All DBs
Position
2914281..2914916
Genome browser
AA seq
211 aa
AA seq
DB search
MNKDKRYEIFSRLRAENPNPVTELEYNSPFELLIAVLFSAQATDVSVNKATRKLFPVANT
PETMLALGVDGLKSYIKTIGLFNAKAENAIKTCQILIEKHNSVVPETREELEALPGVGRK
TANVVLNTAFRQVAMAVDTHIFRFGNRTKVAPGKNVLEVEMKLLKFVPKEFLLDAHHWMI
LHGRYICVARKPKCDACIIEDLCEYKDKTST
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaagacaagcgctacgagattttttctcgcttacgagctgaaaacccaaatccc
gtaactgagctggaatacaactcgccttttgagcttttgattgcggttttattctcagcc
caagccactgatgttagcgtcaacaaagccacacgcaagcttttccctgtggccaacacg
ccagaaaccatgctcgcccttggcgtagatggcttaaaaagctatatcaaaaccattggc
ttatttaacgccaaagccgaaaatgccattaaaacttgccagattctgatcgaaaaacac
aacagtgttgtacctgaaacgcgcgaagagcttgaagccttacctggcgttggccgcaaa
accgccaacgtggttttaaacacggcatttcgacaagtggccatggcggtggatacgcat
atctttcgttttggtaatcgcacaaaagtcgcaccgggaaagaacgtcttagaagtagaa
atgaagctactgaaatttgtgccaaaggaatttctcttggacgctcaccactggatgatt
ttgcatggccgctacatctgtgtagctcgtaaacctaaatgcgatgcctgtattattgaa
gacctctgtgagtacaaagacaagacgtctacctaa
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